Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.41□□□□□ -0.26
APOC4P55056 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 PRELID1P1-202ENST00000567272 903 ntBASIC13.41□□□□□ -0.26
APOC4P55056 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.41□□□□□ -0.26
APOC4P55056 AL390719.2-201ENST00000606993 987 ntBASIC13.41□□□□□ -0.26
APOC4P55056 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.41□□□□□ -0.26
APOC4P55056 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.41□□□□□ -0.26
APOC4P55056 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.41□□□□□ -0.26
APOC4P55056 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
APOC4P55056 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.41□□□□□ -0.26
APOC4P55056 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
APOC4P55056 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOC4P55056 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.4□□□□□ -0.26
APOC4P55056 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.4□□□□□ -0.26
APOC4P55056 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
APOC4P55056 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.4□□□□□ -0.26
APOC4P55056 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC4P55056 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC4P55056 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC4P55056 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.4□□□□□ -0.26
APOC4P55056 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.4□□□□□ -0.26
APOC4P55056 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.4□□□□□ -0.26
APOC4P55056 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.4□□□□□ -0.26
APOC4P55056 AP002414.4-201ENST00000589764 1148 ntBASIC13.4□□□□□ -0.26
APOC4P55056 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.4□□□□□ -0.26
APOC4P55056 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.4□□□□□ -0.26
APOC4P55056 AL691432.3-201ENST00000621860 400 ntBASIC13.4□□□□□ -0.26
APOC4P55056 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
APOC4P55056 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
APOC4P55056 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC4P55056 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC4P55056 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
APOC4P55056 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
APOC4P55056 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
APOC4P55056 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOC4P55056 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
APOC4P55056 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.39□□□□□ -0.27
APOC4P55056 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
APOC4P55056 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
APOC4P55056 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC4P55056 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
APOC4P55056 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC4P55056 RNF126P1-202ENST00000569893 925 ntBASIC13.39□□□□□ -0.27
APOC4P55056 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC4P55056 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.39□□□□□ -0.27
APOC4P55056 NPAP1P7-201ENST00000613027 823 ntBASIC13.39□□□□□ -0.27
APOC4P55056 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.39□□□□□ -0.27
APOC4P55056 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC4P55056 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC4P55056 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
APOC4P55056 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC4P55056 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
APOC4P55056 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC4P55056 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms