Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HMGCS2P54868 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS2P54868 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS2P54868 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.06■□□□□ 0.96
HMGCS2P54868 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.06■□□□□ 0.96
HMGCS2P54868 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.06■□□□□ 0.96
HMGCS2P54868 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.06■□□□□ 0.96
HMGCS2P54868 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.06■□□□□ 0.96
HMGCS2P54868 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.06■□□□□ 0.96
HMGCS2P54868 AC011467.2-201ENST00000598425 242 ntBASIC21.06■□□□□ 0.96
HMGCS2P54868 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.06■□□□□ 0.96
HMGCS2P54868 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HMGCS2P54868 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
HMGCS2P54868 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HMGCS2P54868 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HMGCS2P54868 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.06■□□□□ 0.96
HMGCS2P54868 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCS2P54868 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HMGCS2P54868 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS2P54868 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.05■□□□□ 0.96
HMGCS2P54868 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGCS2P54868 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.05■□□□□ 0.96
HMGCS2P54868 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.05■□□□□ 0.96
HMGCS2P54868 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS2P54868 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS2P54868 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGCS2P54868 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS2P54868 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS2P54868 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.05■□□□□ 0.96
HMGCS2P54868 MIR940-201ENST00000401276 94 ntBASIC21.05■□□□□ 0.96
HMGCS2P54868 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.05■□□□□ 0.96
HMGCS2P54868 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGCS2P54868 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.05■□□□□ 0.96
HMGCS2P54868 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGCS2P54868 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS2P54868 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGCS2P54868 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.05■□□□□ 0.96
HMGCS2P54868 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.05■□□□□ 0.96
HMGCS2P54868 AC116407.3-201ENST00000623905 1129 ntBASIC21.05■□□□□ 0.96
HMGCS2P54868 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.05■□□□□ 0.96
HMGCS2P54868 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
HMGCS2P54868 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGCS2P54868 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HMGCS2P54868 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS2P54868 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS2P54868 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS2P54868 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS2P54868 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS2P54868 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCS2P54868 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGCS2P54868 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
HMGCS2P54868 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.04■□□□□ 0.96
HMGCS2P54868 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.04■□□□□ 0.96
HMGCS2P54868 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.04■□□□□ 0.96
HMGCS2P54868 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 AC092865.5-201ENST00000545435 363 ntBASIC21.04■□□□□ 0.96
HMGCS2P54868 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.04■□□□□ 0.96
HMGCS2P54868 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.04■□□□□ 0.96
HMGCS2P54868 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
HMGCS2P54868 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
HMGCS2P54868 AC005082.1-201ENST00000413042 2259 ntBASIC21.04■□□□□ 0.96
HMGCS2P54868 AC073130.3-201ENST00000624389 2278 ntBASIC21.04■□□□□ 0.96
HMGCS2P54868 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCS2P54868 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.04■□□□□ 0.96
HMGCS2P54868 AP005117.1-201ENST00000584346 1413 ntBASIC21.04■□□□□ 0.96
HMGCS2P54868 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HMGCS2P54868 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCS2P54868 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
HMGCS2P54868 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.03■□□□□ 0.96
HMGCS2P54868 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCS2P54868 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
HMGCS2P54868 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.03■□□□□ 0.96
HMGCS2P54868 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HMGCS2P54868 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.03■□□□□ 0.96
HMGCS2P54868 SART3-203ENST00000546611 1184 ntBASIC21.03■□□□□ 0.96
HMGCS2P54868 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.03■□□□□ 0.96
HMGCS2P54868 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCS2P54868 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCS2P54868 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HMGCS2P54868 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.03■□□□□ 0.96
HMGCS2P54868 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.02■□□□□ 0.96
HMGCS2P54868 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCS2P54868 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.02■□□□□ 0.96
HMGCS2P54868 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms