Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHB4P54760 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHB4P54760 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHB4P54760 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHB4P54760 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHB4P54760 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.52■□□□□ 0.88
EPHB4P54760 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EPHB4P54760 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHB4P54760 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHB4P54760 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.52■□□□□ 0.88
EPHB4P54760 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHB4P54760 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.52■□□□□ 0.88
EPHB4P54760 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.52■□□□□ 0.88
EPHB4P54760 AC092865.5-201ENST00000545435 363 ntBASIC20.52■□□□□ 0.88
EPHB4P54760 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.52■□□□□ 0.88
EPHB4P54760 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.52■□□□□ 0.88
EPHB4P54760 AP001005.1-201ENST00000571755 1248 ntBASIC20.52■□□□□ 0.88
EPHB4P54760 IGHV3-41-201ENST00000613121 348 ntBASIC20.52■□□□□ 0.88
EPHB4P54760 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHB4P54760 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.52■□□□□ 0.88
EPHB4P54760 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
EPHB4P54760 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
EPHB4P54760 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
EPHB4P54760 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
EPHB4P54760 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.52■□□□□ 0.87
EPHB4P54760 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
EPHB4P54760 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.51■□□□□ 0.87
EPHB4P54760 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.51■□□□□ 0.87
EPHB4P54760 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EPHB4P54760 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHB4P54760 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.51■□□□□ 0.87
EPHB4P54760 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHB4P54760 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHB4P54760 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EPHB4P54760 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHB4P54760 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHB4P54760 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHB4P54760 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.51■□□□□ 0.87
EPHB4P54760 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.51■□□□□ 0.87
EPHB4P54760 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
EPHB4P54760 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.51■□□□□ 0.87
EPHB4P54760 SAPCD2P3-201ENST00000455031 850 ntBASIC20.51■□□□□ 0.87
EPHB4P54760 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.51■□□□□ 0.87
EPHB4P54760 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.51■□□□□ 0.87
EPHB4P54760 AC090616.6-201ENST00000582640 721 ntBASIC20.51■□□□□ 0.87
EPHB4P54760 AL390719.2-201ENST00000606993 987 ntBASIC20.51■□□□□ 0.87
EPHB4P54760 REXO1L6P-202ENST00000619970 1078 ntBASIC20.51■□□□□ 0.87
EPHB4P54760 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.51■□□□□ 0.87
EPHB4P54760 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EPHB4P54760 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EPHB4P54760 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHB4P54760 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHB4P54760 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.51■□□□□ 0.87
EPHB4P54760 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EPHB4P54760 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
EPHB4P54760 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EPHB4P54760 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHB4P54760 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EPHB4P54760 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EPHB4P54760 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHB4P54760 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
EPHB4P54760 MIR1233-2-201ENST00000408138 82 ntBASIC20.5■□□□□ 0.87
EPHB4P54760 MIR1233-1-201ENST00000408722 82 ntBASIC20.5■□□□□ 0.87
EPHB4P54760 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 MCCD1P1-208ENST00000445732 328 ntBASIC20.5■□□□□ 0.87
EPHB4P54760 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EPHB4P54760 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.5■□□□□ 0.87
EPHB4P54760 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.5■□□□□ 0.87
EPHB4P54760 POLD2P1-201ENST00000511220 997 ntBASIC20.5■□□□□ 0.87
EPHB4P54760 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.5■□□□□ 0.87
EPHB4P54760 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.5■□□□□ 0.87
EPHB4P54760 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
EPHB4P54760 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHB4P54760 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHB4P54760 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHB4P54760 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHB4P54760 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHB4P54760 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHB4P54760 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHB4P54760 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB4P54760 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB4P54760 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB4P54760 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB4P54760 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
EPHB4P54760 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB4P54760 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB4P54760 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB4P54760 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms