Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GCSHP2-201ENST00000560971 527 ntBASIC18.86■□□□□ 0.61
NEK3P51956 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
NEK3P51956 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.86■□□□□ 0.61
NEK3P51956 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
NEK3P51956 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.86■□□□□ 0.61
NEK3P51956 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NEK3P51956 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NEK3P51956 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK3P51956 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK3P51956 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NEK3P51956 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.86■□□□□ 0.61
NEK3P51956 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.85■□□□□ 0.61
NEK3P51956 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NEK3P51956 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.85■□□□□ 0.61
NEK3P51956 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.85■□□□□ 0.61
NEK3P51956 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.85■□□□□ 0.61
NEK3P51956 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.85■□□□□ 0.61
NEK3P51956 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.85■□□□□ 0.61
NEK3P51956 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 AL109659.2-201ENST00000606809 1674 ntBASIC18.85■□□□□ 0.61
NEK3P51956 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.85■□□□□ 0.61
NEK3P51956 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NEK3P51956 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.85■□□□□ 0.61
NEK3P51956 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NEK3P51956 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NEK3P51956 AC008764.6-201ENST00000595909 2069 ntBASIC18.85■□□□□ 0.61
NEK3P51956 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK3P51956 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NEK3P51956 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.84■□□□□ 0.61
NEK3P51956 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
NEK3P51956 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.84■□□□□ 0.61
NEK3P51956 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NEK3P51956 AL031133.1-201ENST00000406807 723 ntBASIC18.84■□□□□ 0.61
NEK3P51956 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.84■□□□□ 0.61
NEK3P51956 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NEK3P51956 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NEK3P51956 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.84■□□□□ 0.61
NEK3P51956 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.84■□□□□ 0.61
NEK3P51956 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.84■□□□□ 0.61
NEK3P51956 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.84■□□□□ 0.61
NEK3P51956 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK3P51956 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEK3P51956 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.83■□□□□ 0.61
NEK3P51956 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
NEK3P51956 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEK3P51956 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEK3P51956 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEK3P51956 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEK3P51956 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEK3P51956 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEK3P51956 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEK3P51956 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEK3P51956 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.83■□□□□ 0.61
NEK3P51956 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEK3P51956 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NEK3P51956 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.83■□□□□ 0.61
NEK3P51956 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.83■□□□□ 0.61
NEK3P51956 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
NEK3P51956 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEK3P51956 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEK3P51956 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEK3P51956 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.83■□□□□ 0.6
NEK3P51956 STARP1-201ENST00000397973 869 ntBASIC18.83■□□□□ 0.6
NEK3P51956 KRT18P38-201ENST00000449496 1282 ntBASIC18.83■□□□□ 0.6
NEK3P51956 AL671277.2-201ENST00000458060 996 ntBASIC18.83■□□□□ 0.6
NEK3P51956 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.83■□□□□ 0.6
NEK3P51956 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.83■□□□□ 0.6
NEK3P51956 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.83■□□□□ 0.6
NEK3P51956 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms