Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.41■□□□□ 0.7
BRCC3P46736 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
BRCC3P46736 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
BRCC3P46736 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCC3P46736 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRCC3P46736 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCC3P46736 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
BRCC3P46736 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.4■□□□□ 0.7
BRCC3P46736 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCC3P46736 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCC3P46736 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCC3P46736 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCC3P46736 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCC3P46736 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCC3P46736 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
BRCC3P46736 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.4■□□□□ 0.7
BRCC3P46736 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
BRCC3P46736 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.4■□□□□ 0.7
BRCC3P46736 MINOS1P3-201ENST00000457048 203 ntBASIC19.4■□□□□ 0.7
BRCC3P46736 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.4■□□□□ 0.7
BRCC3P46736 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.4■□□□□ 0.7
BRCC3P46736 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.4■□□□□ 0.7
BRCC3P46736 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.4■□□□□ 0.7
BRCC3P46736 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.4■□□□□ 0.7
BRCC3P46736 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.4■□□□□ 0.7
BRCC3P46736 AL031008.1-201ENST00000619963 541 ntBASIC19.4■□□□□ 0.7
BRCC3P46736 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.4■□□□□ 0.7
BRCC3P46736 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCC3P46736 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRCC3P46736 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCC3P46736 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.4■□□□□ 0.7
BRCC3P46736 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.4■□□□□ 0.7
BRCC3P46736 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.4■□□□□ 0.7
BRCC3P46736 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BRCC3P46736 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BRCC3P46736 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.39■□□□□ 0.69
BRCC3P46736 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.39■□□□□ 0.69
BRCC3P46736 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.39■□□□□ 0.69
BRCC3P46736 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 AC079781.3-201ENST00000449110 356 ntBASIC19.39■□□□□ 0.69
BRCC3P46736 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.39■□□□□ 0.69
BRCC3P46736 BNIP3P18-201ENST00000593976 575 ntBASIC19.39■□□□□ 0.69
BRCC3P46736 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.39■□□□□ 0.69
BRCC3P46736 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.39■□□□□ 0.69
BRCC3P46736 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.39■□□□□ 0.69
BRCC3P46736 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.39■□□□□ 0.69
BRCC3P46736 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
BRCC3P46736 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCC3P46736 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
BRCC3P46736 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.38■□□□□ 0.69
BRCC3P46736 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
BRCC3P46736 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 FAAHP1-202ENST00000446499 1238 ntBASIC19.38■□□□□ 0.69
BRCC3P46736 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.38■□□□□ 0.69
BRCC3P46736 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.38■□□□□ 0.69
BRCC3P46736 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.38■□□□□ 0.69
BRCC3P46736 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.38■□□□□ 0.69
BRCC3P46736 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.38■□□□□ 0.69
BRCC3P46736 LINC01711-201ENST00000598340 967 ntBASIC19.38■□□□□ 0.69
BRCC3P46736 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.38■□□□□ 0.69
BRCC3P46736 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCC3P46736 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
BRCC3P46736 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRCC3P46736 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRCC3P46736 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRCC3P46736 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRCC3P46736 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms