Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SSR1P43307 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.47■□□□□ 0.71
SSR1P43307 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.47■□□□□ 0.71
SSR1P43307 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.47■□□□□ 0.71
SSR1P43307 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.47■□□□□ 0.71
SSR1P43307 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.47■□□□□ 0.71
SSR1P43307 MYLKP1-201ENST00000509077 1580 ntBASIC19.47■□□□□ 0.71
SSR1P43307 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SSR1P43307 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.46■□□□□ 0.71
SSR1P43307 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SSR1P43307 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 AL139384.1-201ENST00000612143 3047 ntBASIC19.46■□□□□ 0.71
SSR1P43307 UNC93B2-201ENST00000285383 730 ntBASIC19.46■□□□□ 0.71
SSR1P43307 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.46■□□□□ 0.71
SSR1P43307 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SSR1P43307 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SSR1P43307 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.46■□□□□ 0.71
SSR1P43307 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSR1P43307 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
SSR1P43307 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSR1P43307 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSR1P43307 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSR1P43307 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.45■□□□□ 0.7
SSR1P43307 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSR1P43307 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.45■□□□□ 0.7
SSR1P43307 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.45■□□□□ 0.7
SSR1P43307 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SSR1P43307 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSR1P43307 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSR1P43307 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.45■□□□□ 0.7
SSR1P43307 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.45■□□□□ 0.7
SSR1P43307 MIR4785-201ENST00000585005 73 ntBASIC19.45■□□□□ 0.7
SSR1P43307 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
SSR1P43307 AP006294.2-201ENST00000641667 209 ntBASIC19.45■□□□□ 0.7
SSR1P43307 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSR1P43307 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSR1P43307 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSR1P43307 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.45■□□□□ 0.7
SSR1P43307 AL133373.2-201ENST00000623187 2828 ntBASIC19.45■□□□□ 0.7
SSR1P43307 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
SSR1P43307 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSR1P43307 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.45■□□□□ 0.7
SSR1P43307 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
SSR1P43307 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.45■□□□□ 0.7
SSR1P43307 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSR1P43307 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSR1P43307 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SSR1P43307 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.44■□□□□ 0.7
SSR1P43307 MIR564-202ENST00000385049 94 ntBASIC19.44■□□□□ 0.7
SSR1P43307 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.44■□□□□ 0.7
SSR1P43307 RBM17P1-201ENST00000453646 1190 ntBASIC19.44■□□□□ 0.7
SSR1P43307 SNORA78-201ENST00000459373 127 ntBASIC19.44■□□□□ 0.7
SSR1P43307 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.44■□□□□ 0.7
SSR1P43307 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.44■□□□□ 0.7
SSR1P43307 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.44■□□□□ 0.7
SSR1P43307 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.44■□□□□ 0.7
SSR1P43307 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SSR1P43307 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SSR1P43307 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SSR1P43307 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSR1P43307 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SSR1P43307 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SSR1P43307 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SSR1P43307 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms