Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 POLD2P1-201ENST00000511220 997 ntBASIC20.77■□□□□ 0.92
CNGA1P29973 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.77■□□□□ 0.92
CNGA1P29973 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.77■□□□□ 0.92
CNGA1P29973 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNGA1P29973 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CNGA1P29973 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CNGA1P29973 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNGA1P29973 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNGA1P29973 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNGA1P29973 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNGA1P29973 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.77■□□□□ 0.92
CNGA1P29973 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNGA1P29973 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CNGA1P29973 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.77■□□□□ 0.91
CNGA1P29973 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CNGA1P29973 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CNGA1P29973 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CNGA1P29973 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
CNGA1P29973 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.76■□□□□ 0.91
CNGA1P29973 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.76■□□□□ 0.91
CNGA1P29973 MIR1233-2-201ENST00000408138 82 ntBASIC20.76■□□□□ 0.91
CNGA1P29973 MIR1233-1-201ENST00000408722 82 ntBASIC20.76■□□□□ 0.91
CNGA1P29973 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.76■□□□□ 0.91
CNGA1P29973 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.76■□□□□ 0.91
CNGA1P29973 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.76■□□□□ 0.91
CNGA1P29973 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.76■□□□□ 0.91
CNGA1P29973 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.76■□□□□ 0.91
CNGA1P29973 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.76■□□□□ 0.91
CNGA1P29973 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CNGA1P29973 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.76■□□□□ 0.91
CNGA1P29973 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CNGA1P29973 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CNGA1P29973 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNGA1P29973 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.75■□□□□ 0.91
CNGA1P29973 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNGA1P29973 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNGA1P29973 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CNGA1P29973 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.75■□□□□ 0.91
CNGA1P29973 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.75■□□□□ 0.91
CNGA1P29973 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNGA1P29973 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.75■□□□□ 0.91
CNGA1P29973 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNGA1P29973 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CNGA1P29973 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.75■□□□□ 0.91
CNGA1P29973 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNGA1P29973 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.75■□□□□ 0.91
CNGA1P29973 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNGA1P29973 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.75■□□□□ 0.91
CNGA1P29973 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.75■□□□□ 0.91
CNGA1P29973 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.75■□□□□ 0.91
CNGA1P29973 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.75■□□□□ 0.91
CNGA1P29973 BNIP3P18-201ENST00000593976 575 ntBASIC20.75■□□□□ 0.91
CNGA1P29973 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNGA1P29973 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.75■□□□□ 0.91
CNGA1P29973 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNGA1P29973 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CNGA1P29973 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNGA1P29973 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNGA1P29973 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNGA1P29973 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNGA1P29973 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.74■□□□□ 0.91
CNGA1P29973 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.74■□□□□ 0.91
CNGA1P29973 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNGA1P29973 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNGA1P29973 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.74■□□□□ 0.91
CNGA1P29973 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CNGA1P29973 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNGA1P29973 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNGA1P29973 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CNGA1P29973 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNGA1P29973 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.74■□□□□ 0.91
CNGA1P29973 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CNGA1P29973 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.74■□□□□ 0.91
CNGA1P29973 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.74■□□□□ 0.91
CNGA1P29973 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.74■□□□□ 0.91
CNGA1P29973 TERC-201ENST00000602385 541 ntBASIC20.74■□□□□ 0.91
CNGA1P29973 AC008608.2-201ENST00000606089 416 ntBASIC20.74■□□□□ 0.91
CNGA1P29973 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CNGA1P29973 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNGA1P29973 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms