Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
GDF1P27539 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.56■□□□□ 0.24
GDF1P27539 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.56■□□□□ 0.24
GDF1P27539 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.56■□□□□ 0.24
GDF1P27539 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.56■□□□□ 0.24
GDF1P27539 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.56■□□□□ 0.24
GDF1P27539 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.56■□□□□ 0.24
GDF1P27539 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.56■□□□□ 0.24
GDF1P27539 AC090616.6-201ENST00000582640 721 ntBASIC16.56■□□□□ 0.24
GDF1P27539 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.56■□□□□ 0.24
GDF1P27539 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GDF1P27539 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.56■□□□□ 0.24
GDF1P27539 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 AL353692.3-201ENST00000407031 1396 ntBASIC16.55■□□□□ 0.24
GDF1P27539 CROCCP3-202ENST00000420820 1947 ntBASIC16.55■□□□□ 0.24
GDF1P27539 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
GDF1P27539 AC018445.3-201ENST00000624177 1945 ntBASIC16.55■□□□□ 0.24
GDF1P27539 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
GDF1P27539 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
GDF1P27539 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GDF1P27539 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.55■□□□□ 0.24
GDF1P27539 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.55■□□□□ 0.24
GDF1P27539 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GDF1P27539 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.55■□□□□ 0.24
GDF1P27539 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.55■□□□□ 0.24
GDF1P27539 AP002383.4-201ENST00000442518 975 ntBASIC16.55■□□□□ 0.24
GDF1P27539 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.55■□□□□ 0.24
GDF1P27539 GUSBP12-201ENST00000513727 720 ntBASIC16.55■□□□□ 0.24
GDF1P27539 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.55■□□□□ 0.24
GDF1P27539 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.55■□□□□ 0.24
GDF1P27539 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.55■□□□□ 0.24
GDF1P27539 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 AC126763.1-201ENST00000552015 2118 ntBASIC16.55■□□□□ 0.24
GDF1P27539 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
GDF1P27539 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GDF1P27539 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.54■□□□□ 0.24
GDF1P27539 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.54■□□□□ 0.24
GDF1P27539 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.54■□□□□ 0.24
GDF1P27539 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.54■□□□□ 0.24
GDF1P27539 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.54■□□□□ 0.24
GDF1P27539 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
GDF1P27539 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.54■□□□□ 0.24
GDF1P27539 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 AC004263.2-201ENST00000617183 678 ntBASIC16.54■□□□□ 0.24
GDF1P27539 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.54■□□□□ 0.24
GDF1P27539 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
GDF1P27539 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.54■□□□□ 0.24
GDF1P27539 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.54■□□□□ 0.24
GDF1P27539 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.54■□□□□ 0.24
GDF1P27539 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDF1P27539 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GDF1P27539 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms