Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PTPN3P26045 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.65■□□□□ 0.58
PTPN3P26045 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTPN3P26045 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN3P26045 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN3P26045 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN3P26045 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN3P26045 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN3P26045 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN3P26045 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTPN3P26045 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPN3P26045 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PTPN3P26045 LIN28AP1-201ENST00000429574 405 ntBASIC18.65■□□□□ 0.58
PTPN3P26045 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN3P26045 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPN3P26045 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN3P26045 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN3P26045 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPN3P26045 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PTPN3P26045 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN3P26045 AC005363.2-201ENST00000618631 242 ntBASIC18.65■□□□□ 0.58
PTPN3P26045 AL157888.1-201ENST00000631930 593 ntBASIC18.65■□□□□ 0.58
PTPN3P26045 AL133373.2-201ENST00000623187 2828 ntBASIC18.65■□□□□ 0.58
PTPN3P26045 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PTPN3P26045 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN3P26045 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPN3P26045 AC138028.4-201ENST00000564984 1845 ntBASIC18.65■□□□□ 0.58
PTPN3P26045 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN3P26045 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN3P26045 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN3P26045 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTPN3P26045 NOC2LP2-201ENST00000407594 1944 ntBASIC18.64■□□□□ 0.58
PTPN3P26045 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTPN3P26045 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTPN3P26045 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTPN3P26045 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PTPN3P26045 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTPN3P26045 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTPN3P26045 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PTPN3P26045 TERF1P1-201ENST00000311003 1181 ntBASIC18.64■□□□□ 0.57
PTPN3P26045 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 AC211429.1-201ENST00000415277 523 ntBASIC18.64■□□□□ 0.57
PTPN3P26045 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPN3P26045 ATP5G1P1-201ENST00000448724 379 ntBASIC18.64■□□□□ 0.57
PTPN3P26045 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN3P26045 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PTPN3P26045 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPN3P26045 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PTPN3P26045 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN3P26045 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN3P26045 AC073508.3-201ENST00000619697 1419 ntBASIC18.64■□□□□ 0.57
PTPN3P26045 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
PTPN3P26045 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.64■□□□□ 0.57
PTPN3P26045 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN3P26045 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN3P26045 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN3P26045 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN3P26045 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN3P26045 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN3P26045 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN3P26045 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN3P26045 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN3P26045 AL137013.1-201ENST00000432946 1228 ntBASIC18.63■□□□□ 0.57
PTPN3P26045 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.63■□□□□ 0.57
PTPN3P26045 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PTPN3P26045 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN3P26045 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN3P26045 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN3P26045 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN3P26045 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN3P26045 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN3P26045 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN3P26045 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN3P26045 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN3P26045 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN3P26045 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN3P26045 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN3P26045 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PTPN3P26045 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN3P26045 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN3P26045 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PTPN3P26045 BCL2-203ENST00000589955 5011 ntBASIC18.62■□□□□ 0.57
PTPN3P26045 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN3P26045 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms