Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MMP11P24347 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP11P24347 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
MMP11P24347 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP11P24347 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP11P24347 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.36■□□□□ 0.37
MMP11P24347 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.36■□□□□ 0.37
MMP11P24347 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.36■□□□□ 0.37
MMP11P24347 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MMP11P24347 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MMP11P24347 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP11P24347 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.36■□□□□ 0.37
MMP11P24347 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.36■□□□□ 0.37
MMP11P24347 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.36■□□□□ 0.37
MMP11P24347 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.36■□□□□ 0.37
MMP11P24347 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.36■□□□□ 0.37
MMP11P24347 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 AC005332.8-201ENST00000622750 2735 ntBASIC17.36■□□□□ 0.37
MMP11P24347 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP11P24347 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP11P24347 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.36■□□□□ 0.37
MMP11P24347 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP11P24347 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP11P24347 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP11P24347 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.36■□□□□ 0.37
MMP11P24347 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MMP11P24347 AL162741.1-201ENST00000565563 1558 ntBASIC17.36■□□□□ 0.37
MMP11P24347 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MMP11P24347 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP11P24347 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP11P24347 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP11P24347 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MMP11P24347 MIR662-201ENST00000384847 95 ntBASIC17.35■□□□□ 0.37
MMP11P24347 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
MMP11P24347 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.35■□□□□ 0.37
MMP11P24347 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP11P24347 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP11P24347 AL121672.3-201ENST00000608644 468 ntBASIC17.35■□□□□ 0.37
MMP11P24347 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.35■□□□□ 0.37
MMP11P24347 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.35■□□□□ 0.37
MMP11P24347 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP11P24347 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.35■□□□□ 0.37
MMP11P24347 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP11P24347 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP11P24347 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP11P24347 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
MMP11P24347 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.35■□□□□ 0.37
MMP11P24347 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP11P24347 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP11P24347 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP11P24347 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP11P24347 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP11P24347 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP11P24347 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP11P24347 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
MMP11P24347 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.34■□□□□ 0.37
MMP11P24347 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP11P24347 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MMP11P24347 BX276092.5-203ENST00000456199 560 ntBASIC17.34■□□□□ 0.37
MMP11P24347 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP11P24347 KRT126P-201ENST00000549467 1181 ntBASIC17.34■□□□□ 0.37
MMP11P24347 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
MMP11P24347 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.34■□□□□ 0.37
MMP11P24347 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP11P24347 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP11P24347 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP11P24347 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP11P24347 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP11P24347 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms