Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 BCL2-203ENST00000589955 5011 ntBASIC18.46■□□□□ 0.55
HLA-DPA1P20036 AL390961.4-201ENST00000623958 2535 ntBASIC18.46■□□□□ 0.55
HLA-DPA1P20036 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 AL441883.1-201ENST00000566170 1045 ntBASIC18.46■□□□□ 0.55
HLA-DPA1P20036 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 AL157888.1-201ENST00000631930 593 ntBASIC18.46■□□□□ 0.55
HLA-DPA1P20036 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
HLA-DPA1P20036 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 PVRIG2P-201ENST00000435460 978 ntBASIC18.45■□□□□ 0.54
HLA-DPA1P20036 KRT18P57-201ENST00000443599 1254 ntBASIC18.45■□□□□ 0.54
HLA-DPA1P20036 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 YBX1P2-201ENST00000489612 999 ntBASIC18.45■□□□□ 0.54
HLA-DPA1P20036 KRT18P21-201ENST00000515767 1272 ntBASIC18.45■□□□□ 0.54
HLA-DPA1P20036 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 AC139887.4-201ENST00000607877 719 ntBASIC18.45■□□□□ 0.54
HLA-DPA1P20036 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPA1P20036 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 AC117947.1-201ENST00000427448 529 ntBASIC18.44■□□□□ 0.54
HLA-DPA1P20036 FAM210CP-201ENST00000445714 574 ntBASIC18.44■□□□□ 0.54
HLA-DPA1P20036 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 AC011558.1-201ENST00000623459 338 ntBASIC18.44■□□□□ 0.54
HLA-DPA1P20036 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
HLA-DPA1P20036 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DPA1P20036 AL024508.2-201ENST00000607749 1894 ntBASIC18.43■□□□□ 0.54
HLA-DPA1P20036 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPA1P20036 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms