Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 LINC00167-201ENST00000530583 1419 ntBASIC18.19■□□□□ 0.5
TIMP2P16035 MIR3652-201ENST00000579335 131 ntBASIC18.19■□□□□ 0.5
TIMP2P16035 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TIMP2P16035 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP2P16035 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.19■□□□□ 0.5
TIMP2P16035 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP2P16035 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.19■□□□□ 0.5
TIMP2P16035 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP2P16035 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TIMP2P16035 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TIMP2P16035 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.19■□□□□ 0.5
TIMP2P16035 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP2P16035 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP2P16035 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP2P16035 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMP2P16035 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.18■□□□□ 0.5
TIMP2P16035 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TIMP2P16035 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMP2P16035 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.18■□□□□ 0.5
TIMP2P16035 AL845331.1-201ENST00000424978 1190 ntBASIC18.18■□□□□ 0.5
TIMP2P16035 DUSP5P1-201ENST00000441325 1139 ntBASIC18.18■□□□□ 0.5
TIMP2P16035 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TIMP2P16035 AP000867.3-201ENST00000524675 377 ntBASIC18.18■□□□□ 0.5
TIMP2P16035 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.18■□□□□ 0.5
TIMP2P16035 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.18■□□□□ 0.5
TIMP2P16035 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TIMP2P16035 AC012313.10-201ENST00000623509 926 ntBASIC18.18■□□□□ 0.5
TIMP2P16035 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TIMP2P16035 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TIMP2P16035 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
TIMP2P16035 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TIMP2P16035 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TIMP2P16035 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.18■□□□□ 0.5
TIMP2P16035 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TIMP2P16035 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP2P16035 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.18■□□□□ 0.5
TIMP2P16035 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 AC233702.3-201ENST00000578656 1387 ntBASIC18.17■□□□□ 0.5
TIMP2P16035 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TIMP2P16035 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.17■□□□□ 0.5
TIMP2P16035 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TIMP2P16035 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 AC068472.1-201ENST00000474589 881 ntBASIC18.17■□□□□ 0.5
TIMP2P16035 AC091607.1-201ENST00000490318 1060 ntBASIC18.17■□□□□ 0.5
TIMP2P16035 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.17■□□□□ 0.5
TIMP2P16035 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.17■□□□□ 0.5
TIMP2P16035 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.17■□□□□ 0.5
TIMP2P16035 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.17■□□□□ 0.5
TIMP2P16035 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TIMP2P16035 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.17■□□□□ 0.5
TIMP2P16035 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP2P16035 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP2P16035 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.17■□□□□ 0.5
TIMP2P16035 PHGDH-209ENST00000641074 1780 ntBASIC18.17■□□□□ 0.5
TIMP2P16035 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP2P16035 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP2P16035 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP2P16035 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP2P16035 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms