Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC31.17■■■□□ 2.58
CFTRP13569 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
CFTRP13569 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFTRP13569 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFTRP13569 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CFTRP13569 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFTRP13569 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CFTRP13569 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CFTRP13569 SPDYE21P-201ENST00000413323 827 ntBASIC31.16■■■□□ 2.58
CFTRP13569 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CFTRP13569 MKNK2P1-201ENST00000437526 628 ntBASIC31.16■■■□□ 2.58
CFTRP13569 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC31.16■■■□□ 2.58
CFTRP13569 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC31.16■■■□□ 2.58
CFTRP13569 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
CFTRP13569 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CFTRP13569 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CFTRP13569 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC31.16■■■□□ 2.58
CFTRP13569 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
CFTRP13569 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CFTRP13569 AL157384.1-201ENST00000445995 2473 ntBASIC31.16■■■□□ 2.58
CFTRP13569 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CFTRP13569 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CFTRP13569 PNMT-202ENST00000394246 821 ntTSL 2 BASIC31.15■■■□□ 2.58
CFTRP13569 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC31.15■■■□□ 2.58
CFTRP13569 FAM8A3P-201ENST00000427218 844 ntBASIC31.15■■■□□ 2.58
CFTRP13569 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CFTRP13569 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC31.15■■■□□ 2.58
CFTRP13569 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC31.15■■■□□ 2.58
CFTRP13569 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CFTRP13569 SNAI3-AS1-205ENST00000568633 2096 ntBASIC31.15■■■□□ 2.58
CFTRP13569 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CFTRP13569 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CFTRP13569 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
CFTRP13569 AC097374.2-201ENST00000618617 1306 ntBASIC31.15■■■□□ 2.58
CFTRP13569 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC31.15■■■□□ 2.58
CFTRP13569 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CFTRP13569 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CFTRP13569 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
CFTRP13569 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
CFTRP13569 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC31.14■■■□□ 2.58
CFTRP13569 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFTRP13569 CNN2P11-201ENST00000429351 262 ntBASIC31.14■■■□□ 2.58
CFTRP13569 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFTRP13569 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC31.14■■■□□ 2.58
CFTRP13569 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC31.14■■■□□ 2.58
CFTRP13569 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC31.14■■■□□ 2.58
CFTRP13569 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC31.14■■■□□ 2.58
CFTRP13569 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC31.14■■■□□ 2.58
CFTRP13569 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
CFTRP13569 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFTRP13569 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFTRP13569 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CFTRP13569 AC099343.3-201ENST00000605834 2503 ntBASIC31.14■■■□□ 2.58
CFTRP13569 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFTRP13569 ATP6V0CP3-201ENST00000417255 467 ntBASIC31.14■■■□□ 2.57
CFTRP13569 AL645939.2-201ENST00000427340 991 ntBASIC31.14■■■□□ 2.57
CFTRP13569 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.57
CFTRP13569 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC31.14■■■□□ 2.57
CFTRP13569 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.57
CFTRP13569 TCAP-202ENST00000578283 583 ntTSL 5 BASIC31.14■■■□□ 2.57
CFTRP13569 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC31.14■■■□□ 2.57
CFTRP13569 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
CFTRP13569 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFTRP13569 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFTRP13569 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
CFTRP13569 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC31.13■■■□□ 2.57
CFTRP13569 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CFTRP13569 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
CFTRP13569 CIPC-205ENST00000555437 566 ntTSL 3 BASIC31.13■■■□□ 2.57
CFTRP13569 SPCS2P1-201ENST00000561636 679 ntBASIC31.13■■■□□ 2.57
CFTRP13569 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC31.13■■■□□ 2.57
CFTRP13569 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC31.13■■■□□ 2.57
CFTRP13569 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC31.13■■■□□ 2.57
CFTRP13569 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
CFTRP13569 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC31.13■■■□□ 2.57
CFTRP13569 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFTRP13569 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFTRP13569 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CFTRP13569 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CFTRP13569 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC31.12■■■□□ 2.57
CFTRP13569 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CFTRP13569 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CFTRP13569 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CFTRP13569 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
CFTRP13569 HCG4B-203ENST00000450128 991 ntBASIC31.12■■■□□ 2.57
CFTRP13569 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC31.12■■■□□ 2.57
CFTRP13569 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC31.12■■■□□ 2.57
CFTRP13569 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC31.12■■■□□ 2.57
CFTRP13569 SNHG9-202ENST00000564014 471 ntBASIC31.12■■■□□ 2.57
CFTRP13569 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CFTRP13569 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CFTRP13569 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CFTRP13569 ELL2P1-201ENST00000413990 1906 ntBASIC31.12■■■□□ 2.57
CFTRP13569 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC31.12■■■□□ 2.57
CFTRP13569 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CFTRP13569 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC31.11■■■□□ 2.57
CFTRP13569 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC31.11■■■□□ 2.57
CFTRP13569 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
CFTRP13569 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CFTRP13569 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms