Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT3P12035 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT3P12035 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT3P12035 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT3P12035 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KRT3P12035 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KRT3P12035 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
KRT3P12035 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
KRT3P12035 ATP5G1P1-201ENST00000448724 379 ntBASIC19.28■□□□□ 0.68
KRT3P12035 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT3P12035 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT3P12035 AC005363.2-201ENST00000618631 242 ntBASIC19.28■□□□□ 0.68
KRT3P12035 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.28■□□□□ 0.68
KRT3P12035 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT3P12035 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT3P12035 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
KRT3P12035 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT3P12035 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT3P12035 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT3P12035 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT3P12035 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT3P12035 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT3P12035 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
KRT3P12035 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT3P12035 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.27■□□□□ 0.68
KRT3P12035 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT3P12035 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT3P12035 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT3P12035 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.27■□□□□ 0.68
KRT3P12035 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
KRT3P12035 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT3P12035 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT3P12035 AC092865.7-201ENST00000641832 219 ntBASIC19.27■□□□□ 0.68
KRT3P12035 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT3P12035 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT3P12035 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT3P12035 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT3P12035 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT3P12035 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.27■□□□□ 0.67
KRT3P12035 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT3P12035 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
KRT3P12035 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KRT3P12035 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KRT3P12035 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT3P12035 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KRT3P12035 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 AC113347.1-201ENST00000413321 391 ntBASIC19.26■□□□□ 0.67
KRT3P12035 AC211429.1-201ENST00000415277 523 ntBASIC19.26■□□□□ 0.67
KRT3P12035 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT3P12035 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.26■□□□□ 0.67
KRT3P12035 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KRT3P12035 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT3P12035 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT3P12035 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.26■□□□□ 0.67
KRT3P12035 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
KRT3P12035 MIR3917-201ENST00000580971 93 ntBASIC19.26■□□□□ 0.67
KRT3P12035 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.26■□□□□ 0.67
KRT3P12035 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
KRT3P12035 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT3P12035 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KRT3P12035 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KRT3P12035 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 NOC2LP1-202ENST00000452600 2235 ntBASIC19.25■□□□□ 0.67
KRT3P12035 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT3P12035 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT3P12035 PHGDH-209ENST00000641074 1780 ntBASIC19.25■□□□□ 0.67
KRT3P12035 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
KRT3P12035 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
KRT3P12035 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms