Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CD63-204ENST00000546939 779 ntTSL 3 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 PNMT-203ENST00000581428 677 ntTSL 2 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 AC055717.3-201ENST00000622967 595 ntBASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 AC125634.1-201ENST00000438758 1403 ntBASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 OR7E14P-202ENST00000530490 1290 ntBASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 AL356309.3-201ENST00000624132 1934 ntBASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CSB-PGBD3P0DP91 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 RAB17-203ENST00000409576 466 ntTSL 3 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 AC012640.2-201ENST00000561606 901 ntBASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CSB-PGBD3P0DP91 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CSB-PGBD3P0DP91 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CSB-PGBD3P0DP91 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CSB-PGBD3P0DP91 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.46
CSB-PGBD3P0DP91 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CSB-PGBD3P0DP91 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CSB-PGBD3P0DP91 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.46
CSB-PGBD3P0DP91 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 MYLKP1-201ENST00000509077 1580 ntBASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 AC034105.1-201ENST00000563488 319 ntBASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 AC010327.4-202ENST00000591484 748 ntBASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 FAM197Y3-203ENST00000618346 717 ntBASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 AC083906.6-201ENST00000641366 219 ntBASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 BID-204ENST00000399767 2129 ntTSL 2 BASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
CSB-PGBD3P0DP91 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC24.13■■□□□ 1.45
CSB-PGBD3P0DP91 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms