Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.96■□□□□ 0.63
CD48P09326 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CD48P09326 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CD48P09326 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.95■□□□□ 0.62
CD48P09326 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.95■□□□□ 0.62
CD48P09326 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CD48P09326 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CD48P09326 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CD48P09326 AL512604.3-201ENST00000569583 964 ntBASIC18.95■□□□□ 0.62
CD48P09326 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CD48P09326 AC073912.3-201ENST00000624414 853 ntBASIC18.95■□□□□ 0.62
CD48P09326 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CD48P09326 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CD48P09326 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.95■□□□□ 0.62
CD48P09326 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.95■□□□□ 0.62
CD48P09326 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.95■□□□□ 0.62
CD48P09326 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.95■□□□□ 0.62
CD48P09326 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CD48P09326 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD48P09326 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CD48P09326 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CD48P09326 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.94■□□□□ 0.62
CD48P09326 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CD48P09326 GCSHP2-201ENST00000560971 527 ntBASIC18.94■□□□□ 0.62
CD48P09326 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.94■□□□□ 0.62
CD48P09326 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.94■□□□□ 0.62
CD48P09326 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.94■□□□□ 0.62
CD48P09326 AL157888.1-201ENST00000631930 593 ntBASIC18.94■□□□□ 0.62
CD48P09326 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.94■□□□□ 0.62
CD48P09326 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.94■□□□□ 0.62
CD48P09326 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
CD48P09326 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CD48P09326 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.94■□□□□ 0.62
CD48P09326 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD48P09326 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.93■□□□□ 0.62
CD48P09326 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.93■□□□□ 0.62
CD48P09326 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CD48P09326 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.93■□□□□ 0.62
CD48P09326 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.93■□□□□ 0.62
CD48P09326 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.93■□□□□ 0.62
CD48P09326 MIR3917-201ENST00000580971 93 ntBASIC18.93■□□□□ 0.62
CD48P09326 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CD48P09326 AL023973.1-201ENST00000624619 620 ntBASIC18.93■□□□□ 0.62
CD48P09326 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.93■□□□□ 0.62
CD48P09326 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CD48P09326 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CD48P09326 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD48P09326 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CD48P09326 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms