Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RETP07949 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.42■□□□□ 0.54
RETP07949 AL355385.1-201ENST00000606123 409 ntBASIC18.42■□□□□ 0.54
RETP07949 AC148477.8-201ENST00000624298 468 ntBASIC18.42■□□□□ 0.54
RETP07949 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.42■□□□□ 0.54
RETP07949 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.42■□□□□ 0.54
RETP07949 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
RETP07949 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.41■□□□□ 0.54
RETP07949 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.41■□□□□ 0.54
RETP07949 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.41■□□□□ 0.54
RETP07949 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.41■□□□□ 0.54
RETP07949 IGHGP-201ENST00000390555 1178 ntBASIC18.41■□□□□ 0.54
RETP07949 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RETP07949 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.41■□□□□ 0.54
RETP07949 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.41■□□□□ 0.54
RETP07949 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.41■□□□□ 0.54
RETP07949 AC139887.3-201ENST00000568585 713 ntBASIC18.41■□□□□ 0.54
RETP07949 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.41■□□□□ 0.54
RETP07949 AL591684.3-201ENST00000605187 298 ntBASIC18.41■□□□□ 0.54
RETP07949 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 NEFHP1-201ENST00000412845 2629 ntBASIC18.41■□□□□ 0.54
RETP07949 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.41■□□□□ 0.54
RETP07949 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.41■□□□□ 0.54
RETP07949 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RETP07949 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.4■□□□□ 0.54
RETP07949 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RETP07949 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.4■□□□□ 0.54
RETP07949 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RETP07949 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.4■□□□□ 0.54
RETP07949 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
RETP07949 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.4■□□□□ 0.54
RETP07949 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.4■□□□□ 0.54
RETP07949 AL139424.1-201ENST00000607572 797 ntBASIC18.4■□□□□ 0.54
RETP07949 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
RETP07949 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.4■□□□□ 0.54
RETP07949 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 CROCCP3-202ENST00000420820 1947 ntBASIC18.4■□□□□ 0.54
RETP07949 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RETP07949 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RETP07949 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RETP07949 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.39■□□□□ 0.53
RETP07949 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RETP07949 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
RETP07949 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RETP07949 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RETP07949 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.39■□□□□ 0.53
RETP07949 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RETP07949 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.39■□□□□ 0.53
RETP07949 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RETP07949 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.39■□□□□ 0.53
RETP07949 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.39■□□□□ 0.53
RETP07949 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RETP07949 AP005901.3-202ENST00000581653 237 ntBASIC18.39■□□□□ 0.53
RETP07949 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
RETP07949 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.39■□□□□ 0.53
RETP07949 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RETP07949 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RETP07949 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RETP07949 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RETP07949 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RETP07949 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.39■□□□□ 0.53
RETP07949 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms