Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.22■□□□□ 0.67
ERBB2P04626 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.22■□□□□ 0.67
ERBB2P04626 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.21■□□□□ 0.67
ERBB2P04626 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
ERBB2P04626 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.21■□□□□ 0.67
ERBB2P04626 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ERBB2P04626 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.21■□□□□ 0.67
ERBB2P04626 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 AC022616.7-201ENST00000525383 220 ntBASIC19.21■□□□□ 0.67
ERBB2P04626 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.21■□□□□ 0.67
ERBB2P04626 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.21■□□□□ 0.67
ERBB2P04626 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 HYMAI.1-201ENST00000620949 238 ntBASIC19.21■□□□□ 0.67
ERBB2P04626 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.21■□□□□ 0.67
ERBB2P04626 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.21■□□□□ 0.67
ERBB2P04626 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.21■□□□□ 0.67
ERBB2P04626 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERBB2P04626 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
ERBB2P04626 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ERBB2P04626 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.2■□□□□ 0.66
ERBB2P04626 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.2■□□□□ 0.66
ERBB2P04626 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
ERBB2P04626 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.2■□□□□ 0.66
ERBB2P04626 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.2■□□□□ 0.66
ERBB2P04626 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.2■□□□□ 0.66
ERBB2P04626 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
ERBB2P04626 HLA-F-220ENST00000434407 884 ntBASIC19.2■□□□□ 0.66
ERBB2P04626 FAM210CP-201ENST00000445714 574 ntBASIC19.2■□□□□ 0.66
ERBB2P04626 AC112907.2-201ENST00000448639 330 ntBASIC19.2■□□□□ 0.66
ERBB2P04626 AC092647.4-201ENST00000457211 535 ntBASIC19.2■□□□□ 0.66
ERBB2P04626 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.2■□□□□ 0.66
ERBB2P04626 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.2■□□□□ 0.66
ERBB2P04626 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.2■□□□□ 0.66
ERBB2P04626 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ERBB2P04626 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERBB2P04626 NOC2LP1-202ENST00000452600 2235 ntBASIC19.2■□□□□ 0.66
ERBB2P04626 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.2■□□□□ 0.66
ERBB2P04626 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ERBB2P04626 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.2■□□□□ 0.66
ERBB2P04626 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.19■□□□□ 0.66
ERBB2P04626 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERBB2P04626 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERBB2P04626 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.19■□□□□ 0.66
ERBB2P04626 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.19■□□□□ 0.66
ERBB2P04626 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERBB2P04626 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.19■□□□□ 0.66
ERBB2P04626 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERBB2P04626 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ERBB2P04626 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ERBB2P04626 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERBB2P04626 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERBB2P04626 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERBB2P04626 FAM8A6P-201ENST00000407496 1135 ntBASIC19.19■□□□□ 0.66
ERBB2P04626 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.19■□□□□ 0.66
ERBB2P04626 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.19■□□□□ 0.66
ERBB2P04626 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.19■□□□□ 0.66
ERBB2P04626 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.19■□□□□ 0.66
ERBB2P04626 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ERBB2P04626 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
ERBB2P04626 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERBB2P04626 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERBB2P04626 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ERBB2P04626 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERBB2P04626 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.19■□□□□ 0.66
ERBB2P04626 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERBB2P04626 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms