Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 LINC01711-201ENST00000598340 967 ntBASIC20.5■□□□□ 0.87
GGPS1O95749 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GGPS1O95749 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.5■□□□□ 0.87
GGPS1O95749 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
GGPS1O95749 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.5■□□□□ 0.87
GGPS1O95749 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.5■□□□□ 0.87
GGPS1O95749 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GGPS1O95749 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
GGPS1O95749 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 AC093503.3-201ENST00000624917 2352 ntBASIC20.49■□□□□ 0.87
GGPS1O95749 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
GGPS1O95749 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.49■□□□□ 0.87
GGPS1O95749 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.49■□□□□ 0.87
GGPS1O95749 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.49■□□□□ 0.87
GGPS1O95749 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
GGPS1O95749 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.49■□□□□ 0.87
GGPS1O95749 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.49■□□□□ 0.87
GGPS1O95749 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.49■□□□□ 0.87
GGPS1O95749 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.49■□□□□ 0.87
GGPS1O95749 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GGPS1O95749 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GGPS1O95749 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.48■□□□□ 0.87
GGPS1O95749 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
GGPS1O95749 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
GGPS1O95749 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.48■□□□□ 0.87
GGPS1O95749 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
GGPS1O95749 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GGPS1O95749 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GGPS1O95749 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
GGPS1O95749 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
GGPS1O95749 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.48■□□□□ 0.87
GGPS1O95749 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.48■□□□□ 0.87
GGPS1O95749 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.48■□□□□ 0.87
GGPS1O95749 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.48■□□□□ 0.87
GGPS1O95749 AL031008.1-201ENST00000619963 541 ntBASIC20.48■□□□□ 0.87
GGPS1O95749 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
GGPS1O95749 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.48■□□□□ 0.87
GGPS1O95749 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GGPS1O95749 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
GGPS1O95749 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GGPS1O95749 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.47■□□□□ 0.87
GGPS1O95749 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GGPS1O95749 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
GGPS1O95749 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GGPS1O95749 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
GGPS1O95749 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GGPS1O95749 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
GGPS1O95749 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GGPS1O95749 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GGPS1O95749 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.47■□□□□ 0.87
GGPS1O95749 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
GGPS1O95749 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GGPS1O95749 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GGPS1O95749 FDX1P1-201ENST00000449115 551 ntBASIC20.47■□□□□ 0.87
GGPS1O95749 MINOS1P3-201ENST00000457048 203 ntBASIC20.47■□□□□ 0.87
GGPS1O95749 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.47■□□□□ 0.87
GGPS1O95749 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.47■□□□□ 0.87
GGPS1O95749 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.47■□□□□ 0.87
GGPS1O95749 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.47■□□□□ 0.87
GGPS1O95749 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.47■□□□□ 0.87
GGPS1O95749 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GGPS1O95749 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GGPS1O95749 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.47■□□□□ 0.87
GGPS1O95749 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.47■□□□□ 0.87
GGPS1O95749 AC005082.1-201ENST00000413042 2259 ntBASIC20.47■□□□□ 0.87
GGPS1O95749 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GGPS1O95749 ANO7L1-203ENST00000602586 1720 ntBASIC20.47■□□□□ 0.87
GGPS1O95749 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
GGPS1O95749 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.46■□□□□ 0.87
GGPS1O95749 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
GGPS1O95749 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 KRT8P10-201ENST00000450021 1447 ntBASIC20.46■□□□□ 0.87
GGPS1O95749 AC120498.9-201ENST00000339021 3867 ntBASIC20.46■□□□□ 0.87
GGPS1O95749 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.46■□□□□ 0.87
GGPS1O95749 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
GGPS1O95749 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms