Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PHGDH-209ENST00000641074 1780 ntBASIC18.4■□□□□ 0.54
VAPBO95292 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAPBO95292 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
VAPBO95292 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VAPBO95292 AP000997.3-201ENST00000623333 2250 ntBASIC18.39■□□□□ 0.54
VAPBO95292 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
VAPBO95292 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VAPBO95292 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VAPBO95292 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VAPBO95292 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VAPBO95292 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.39■□□□□ 0.53
VAPBO95292 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.39■□□□□ 0.53
VAPBO95292 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VAPBO95292 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
VAPBO95292 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VAPBO95292 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.39■□□□□ 0.53
VAPBO95292 ECEL1P2-202ENST00000465689 757 ntBASIC18.39■□□□□ 0.53
VAPBO95292 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VAPBO95292 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.39■□□□□ 0.53
VAPBO95292 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.39■□□□□ 0.53
VAPBO95292 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
VAPBO95292 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.39■□□□□ 0.53
VAPBO95292 AC066615.1-201ENST00000640911 628 ntBASIC18.39■□□□□ 0.53
VAPBO95292 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VAPBO95292 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.39■□□□□ 0.53
VAPBO95292 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VAPBO95292 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
VAPBO95292 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
VAPBO95292 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VAPBO95292 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VAPBO95292 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.39■□□□□ 0.53
VAPBO95292 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VAPBO95292 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.39■□□□□ 0.53
VAPBO95292 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VAPBO95292 AL096828.2-201ENST00000567259 1965 ntBASIC18.39■□□□□ 0.53
VAPBO95292 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VAPBO95292 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.38■□□□□ 0.53
VAPBO95292 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.38■□□□□ 0.53
VAPBO95292 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
VAPBO95292 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VAPBO95292 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.38■□□□□ 0.53
VAPBO95292 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.38■□□□□ 0.53
VAPBO95292 AC138028.4-201ENST00000564984 1845 ntBASIC18.38■□□□□ 0.53
VAPBO95292 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.38■□□□□ 0.53
VAPBO95292 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.38■□□□□ 0.53
VAPBO95292 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
VAPBO95292 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
VAPBO95292 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.38■□□□□ 0.53
VAPBO95292 AC104390.1-201ENST00000555663 520 ntBASIC18.38■□□□□ 0.53
VAPBO95292 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.38■□□□□ 0.53
VAPBO95292 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAPBO95292 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.38■□□□□ 0.53
VAPBO95292 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
VAPBO95292 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VAPBO95292 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
VAPBO95292 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.37■□□□□ 0.53
VAPBO95292 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
VAPBO95292 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.37■□□□□ 0.53
VAPBO95292 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.37■□□□□ 0.53
VAPBO95292 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
VAPBO95292 FAM87A-204ENST00000613235 858 ntBASIC18.37■□□□□ 0.53
VAPBO95292 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.37■□□□□ 0.53
VAPBO95292 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VAPBO95292 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.37■□□□□ 0.53
VAPBO95292 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
VAPBO95292 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.37■□□□□ 0.53
VAPBO95292 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.37■□□□□ 0.53
VAPBO95292 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VAPBO95292 AC067852.2-201ENST00000590513 2313 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms