Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CLSTN1O94985 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLSTN1O94985 TSPY14P-201ENST00000303979 915 ntBASIC20.24■□□□□ 0.83
CLSTN1O94985 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.24■□□□□ 0.83
CLSTN1O94985 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLSTN1O94985 LINC01023-201ENST00000606054 436 ntBASIC20.24■□□□□ 0.83
CLSTN1O94985 AC008622.2-201ENST00000617006 1229 ntBASIC20.24■□□□□ 0.83
CLSTN1O94985 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CLSTN1O94985 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLSTN1O94985 AC007613.1-201ENST00000572811 2597 ntBASIC20.24■□□□□ 0.83
CLSTN1O94985 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 AL031598.1-201ENST00000561511 1773 ntBASIC20.23■□□□□ 0.83
CLSTN1O94985 NOC2LP2-201ENST00000407594 1944 ntBASIC20.23■□□□□ 0.83
CLSTN1O94985 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLSTN1O94985 BICD1-207ENST00000551848 1962 ntBASIC20.23■□□□□ 0.83
CLSTN1O94985 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.23■□□□□ 0.83
CLSTN1O94985 AC211429.1-201ENST00000415277 523 ntBASIC20.23■□□□□ 0.83
CLSTN1O94985 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLSTN1O94985 AC007663.1-201ENST00000438948 1240 ntBASIC20.23■□□□□ 0.83
CLSTN1O94985 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.23■□□□□ 0.83
CLSTN1O94985 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLSTN1O94985 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLSTN1O94985 AL353719.1-201ENST00000566847 864 ntBASIC20.23■□□□□ 0.83
CLSTN1O94985 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.23■□□□□ 0.83
CLSTN1O94985 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.23■□□□□ 0.83
CLSTN1O94985 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.23■□□□□ 0.83
CLSTN1O94985 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLSTN1O94985 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLSTN1O94985 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLSTN1O94985 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLSTN1O94985 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.23■□□□□ 0.83
CLSTN1O94985 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLSTN1O94985 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLSTN1O94985 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLSTN1O94985 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLSTN1O94985 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.23■□□□□ 0.83
CLSTN1O94985 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLSTN1O94985 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.22■□□□□ 0.83
CLSTN1O94985 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.22■□□□□ 0.83
CLSTN1O94985 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLSTN1O94985 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLSTN1O94985 F11R-206ENST00000621309 4770 ntTSL 5 BASIC20.22■□□□□ 0.83
CLSTN1O94985 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLSTN1O94985 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.22■□□□□ 0.83
CLSTN1O94985 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLSTN1O94985 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
CLSTN1O94985 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
CLSTN1O94985 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.22■□□□□ 0.83
CLSTN1O94985 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.22■□□□□ 0.83
CLSTN1O94985 AC083906.6-201ENST00000641366 219 ntBASIC20.22■□□□□ 0.83
CLSTN1O94985 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.22■□□□□ 0.83
CLSTN1O94985 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
CLSTN1O94985 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CLSTN1O94985 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLSTN1O94985 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.22■□□□□ 0.83
CLSTN1O94985 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLSTN1O94985 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLSTN1O94985 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.21■□□□□ 0.83
CLSTN1O94985 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.21■□□□□ 0.83
CLSTN1O94985 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLSTN1O94985 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLSTN1O94985 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CLSTN1O94985 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.21■□□□□ 0.83
CLSTN1O94985 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.21■□□□□ 0.83
CLSTN1O94985 AC008556.1-201ENST00000610908 2040 ntBASIC20.21■□□□□ 0.83
CLSTN1O94985 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.21■□□□□ 0.83
CLSTN1O94985 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLSTN1O94985 AL023284.2-201ENST00000405850 579 ntBASIC20.21■□□□□ 0.83
CLSTN1O94985 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.21■□□□□ 0.83
CLSTN1O94985 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLSTN1O94985 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CLSTN1O94985 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLSTN1O94985 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLSTN1O94985 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLSTN1O94985 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CLSTN1O94985 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLSTN1O94985 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.21■□□□□ 0.83
CLSTN1O94985 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLSTN1O94985 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLSTN1O94985 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLSTN1O94985 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLSTN1O94985 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms