Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 HBZP1-201ENST00000354915 429 ntBASIC17.17■□□□□ 0.34
PRAMEF2O60811 MIR149-201ENST00000384879 89 ntBASIC17.17■□□□□ 0.34
PRAMEF2O60811 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 AC009102.3-201ENST00000623118 1491 ntBASIC17.17■□□□□ 0.34
PRAMEF2O60811 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF2O60811 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.17■□□□□ 0.34
PRAMEF2O60811 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF2O60811 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PRAMEF2O60811 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF2O60811 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEF2O60811 KRT18P48-201ENST00000434763 852 ntBASIC17.16■□□□□ 0.34
PRAMEF2O60811 HCG4P8-203ENST00000443049 980 ntBASIC17.16■□□□□ 0.34
PRAMEF2O60811 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF2O60811 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.16■□□□□ 0.34
PRAMEF2O60811 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
PRAMEF2O60811 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF2O60811 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF2O60811 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.15■□□□□ 0.34
PRAMEF2O60811 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.15■□□□□ 0.34
PRAMEF2O60811 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF2O60811 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms