Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNCRIPO60506 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCRIPO60506 IGHV3-41-201ENST00000613121 348 ntBASIC18.68■□□□□ 0.58
SYNCRIPO60506 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNCRIPO60506 HEIH-201ENST00000623091 1652 ntBASIC18.68■□□□□ 0.58
SYNCRIPO60506 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCRIPO60506 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNCRIPO60506 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNCRIPO60506 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SYNCRIPO60506 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNCRIPO60506 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNCRIPO60506 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCRIPO60506 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCRIPO60506 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNCRIPO60506 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCRIPO60506 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCRIPO60506 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCRIPO60506 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCRIPO60506 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCRIPO60506 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCRIPO60506 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 AL049812.1-201ENST00000432563 2267 ntBASIC18.67■□□□□ 0.58
SYNCRIPO60506 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNCRIPO60506 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SYNCRIPO60506 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
SYNCRIPO60506 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
SYNCRIPO60506 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SYNCRIPO60506 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNCRIPO60506 DRAXINP1-201ENST00000437611 948 ntBASIC18.67■□□□□ 0.58
SYNCRIPO60506 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.67■□□□□ 0.58
SYNCRIPO60506 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.67■□□□□ 0.58
SYNCRIPO60506 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNCRIPO60506 AC024563.2-201ENST00000603282 481 ntBASIC18.67■□□□□ 0.58
SYNCRIPO60506 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNCRIPO60506 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCRIPO60506 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
SYNCRIPO60506 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SYNCRIPO60506 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 NUS1P1-201ENST00000446295 882 ntBASIC18.66■□□□□ 0.58
SYNCRIPO60506 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 GPR32P1-201ENST00000601788 811 ntBASIC18.66■□□□□ 0.58
SYNCRIPO60506 AL390719.2-201ENST00000606993 987 ntBASIC18.66■□□□□ 0.58
SYNCRIPO60506 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SYNCRIPO60506 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNCRIPO60506 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms