Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA12O60330 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA12O60330 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA12O60330 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA12O60330 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA12O60330 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA12O60330 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA12O60330 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA12O60330 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 AC007613.1-201ENST00000572811 2597 ntBASIC18.11■□□□□ 0.49
PCDHGA12O60330 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 IGHV3-47-201ENST00000425060 335 ntBASIC18.11■□□□□ 0.49
PCDHGA12O60330 KRT16P4-201ENST00000453883 522 ntBASIC18.11■□□□□ 0.49
PCDHGA12O60330 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 GUSBP12-201ENST00000513727 720 ntBASIC18.11■□□□□ 0.49
PCDHGA12O60330 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 AC099336.1-202ENST00000602961 463 ntBASIC18.11■□□□□ 0.49
PCDHGA12O60330 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 AC120498.9-201ENST00000339021 3867 ntBASIC18.11■□□□□ 0.49
PCDHGA12O60330 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 LINC00167-201ENST00000530583 1419 ntBASIC18.11■□□□□ 0.49
PCDHGA12O60330 KRT8P32-201ENST00000512863 1461 ntBASIC18.11■□□□□ 0.49
PCDHGA12O60330 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA12O60330 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA12O60330 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 AC005082.1-201ENST00000413042 2259 ntBASIC18.1■□□□□ 0.49
PCDHGA12O60330 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA12O60330 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA12O60330 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGA12O60330 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 TEX21P-204ENST00000641479 1693 ntBASIC18.1■□□□□ 0.49
PCDHGA12O60330 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGA12O60330 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGA12O60330 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
PCDHGA12O60330 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGA12O60330 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PCDHGA12O60330 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA12O60330 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGA12O60330 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGA12O60330 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA12O60330 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA12O60330 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA12O60330 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA12O60330 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA12O60330 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA12O60330 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA12O60330 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA12O60330 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA12O60330 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA12O60330 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA12O60330 RN7SL606P-201ENST00000472779 293 ntBASIC18.09■□□□□ 0.49
PCDHGA12O60330 VENTXP7-201ENST00000475503 772 ntBASIC18.09■□□□□ 0.49
PCDHGA12O60330 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA12O60330 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA12O60330 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGA12O60330 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA12O60330 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGA12O60330 AL592071.1-201ENST00000611956 408 ntBASIC18.09■□□□□ 0.49
PCDHGA12O60330 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA12O60330 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA12O60330 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGA12O60330 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA12O60330 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA12O60330 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms