Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP2A1O14983 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2A1O14983 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2A1O14983 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2A1O14983 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A1O14983 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A1O14983 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A1O14983 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A1O14983 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A1O14983 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.89■□□□□ 0.93
ATP2A1O14983 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ATP2A1O14983 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A1O14983 MIR5100-201ENST00000579544 119 ntBASIC20.89■□□□□ 0.93
ATP2A1O14983 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP2A1O14983 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP2A1O14983 AC005336.2-201ENST00000593183 939 ntBASIC20.89■□□□□ 0.93
ATP2A1O14983 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.89■□□□□ 0.93
ATP2A1O14983 AC009154.2-201ENST00000621177 724 ntBASIC20.89■□□□□ 0.93
ATP2A1O14983 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A1O14983 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A1O14983 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP2A1O14983 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A1O14983 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2A1O14983 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ATP2A1O14983 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.89■□□□□ 0.93
ATP2A1O14983 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ATP2A1O14983 AL499627.1-201ENST00000569373 2188 ntBASIC20.88■□□□□ 0.93
ATP2A1O14983 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ATP2A1O14983 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP2A1O14983 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2A1O14983 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.88■□□□□ 0.93
ATP2A1O14983 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP2A1O14983 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2A1O14983 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ATP2A1O14983 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ATP2A1O14983 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2A1O14983 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ATP2A1O14983 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A1O14983 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ATP2A1O14983 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.87■□□□□ 0.93
ATP2A1O14983 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2A1O14983 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2A1O14983 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ATP2A1O14983 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2A1O14983 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A1O14983 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A1O14983 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A1O14983 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A1O14983 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A1O14983 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.86■□□□□ 0.93
ATP2A1O14983 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2A1O14983 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.86■□□□□ 0.93
ATP2A1O14983 MRPL3P1-201ENST00000400109 1033 ntBASIC20.86■□□□□ 0.93
ATP2A1O14983 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2A1O14983 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A1O14983 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.86■□□□□ 0.93
ATP2A1O14983 AP000347.1-202ENST00000435868 847 ntBASIC20.86■□□□□ 0.93
ATP2A1O14983 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.86■□□□□ 0.93
ATP2A1O14983 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.86■□□□□ 0.93
ATP2A1O14983 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2A1O14983 AL591684.3-201ENST00000605187 298 ntBASIC20.86■□□□□ 0.93
ATP2A1O14983 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A1O14983 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2A1O14983 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2A1O14983 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A1O14983 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A1O14983 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms