Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDH17O14917 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDH17O14917 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDH17O14917 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDH17O14917 AL136038.3-201ENST00000561909 1096 ntBASIC17.48■□□□□ 0.39
PCDH17O14917 AC009065.1-201ENST00000564055 1225 ntBASIC17.48■□□□□ 0.39
PCDH17O14917 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDH17O14917 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDH17O14917 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
PCDH17O14917 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH17O14917 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDH17O14917 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH17O14917 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH17O14917 MIR564-202ENST00000385049 94 ntBASIC17.47■□□□□ 0.39
PCDH17O14917 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH17O14917 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDH17O14917 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH17O14917 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDH17O14917 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDH17O14917 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PCDH17O14917 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH17O14917 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH17O14917 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDH17O14917 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH17O14917 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.46■□□□□ 0.39
PCDH17O14917 RASA4DP-201ENST00000460726 1199 ntBASIC17.46■□□□□ 0.39
PCDH17O14917 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDH17O14917 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH17O14917 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH17O14917 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH17O14917 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.46■□□□□ 0.39
PCDH17O14917 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH17O14917 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 NOC2LP2-201ENST00000407594 1944 ntBASIC17.46■□□□□ 0.39
PCDH17O14917 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDH17O14917 AC034236.2-201ENST00000606662 1610 ntBASIC17.46■□□□□ 0.39
PCDH17O14917 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDH17O14917 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH17O14917 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDH17O14917 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.46■□□□□ 0.38
PCDH17O14917 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 HCG11-201ENST00000411553 5696 ntBASIC17.45■□□□□ 0.38
PCDH17O14917 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDH17O14917 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDH17O14917 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDH17O14917 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 AC112907.2-201ENST00000448639 330 ntBASIC17.45■□□□□ 0.38
PCDH17O14917 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDH17O14917 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 ZNF444P1-201ENST00000559497 298 ntBASIC17.45■□□□□ 0.38
PCDH17O14917 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDH17O14917 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms