Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CHD1O14646 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CHD1O14646 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
CHD1O14646 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CHD1O14646 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CHD1O14646 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CHD1O14646 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CHD1O14646 FP475955.4-201ENST00000623131 1990 ntBASIC29.44■■■□□ 2.3
CHD1O14646 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC29.44■■■□□ 2.3
CHD1O14646 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CHD1O14646 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC29.44■■■□□ 2.3
CHD1O14646 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CHD1O14646 SLBP-205ENST00000488267 987 ntTSL 2 BASIC29.44■■■□□ 2.3
CHD1O14646 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CHD1O14646 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC29.44■■■□□ 2.3
CHD1O14646 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CHD1O14646 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC29.44■■■□□ 2.3
CHD1O14646 AC008667.4-201ENST00000607370 168 ntBASIC29.44■■■□□ 2.3
CHD1O14646 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC29.44■■■□□ 2.3
CHD1O14646 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC29.44■■■□□ 2.3
CHD1O14646 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC29.44■■■□□ 2.3
CHD1O14646 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHD1O14646 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC29.43■■■□□ 2.3
CHD1O14646 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHD1O14646 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC29.43■■■□□ 2.3
CHD1O14646 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC29.43■■■□□ 2.3
CHD1O14646 AC022145.2-201ENST00000598203 171 ntBASIC29.43■■■□□ 2.3
CHD1O14646 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC29.43■■■□□ 2.3
CHD1O14646 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHD1O14646 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHD1O14646 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC29.42■■■□□ 2.3
CHD1O14646 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC29.42■■■□□ 2.3
CHD1O14646 AC236430.1-201ENST00000402231 743 ntBASIC29.42■■■□□ 2.3
CHD1O14646 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC29.42■■■□□ 2.3
CHD1O14646 KRT18P65-201ENST00000439811 1286 ntBASIC29.42■■■□□ 2.3
CHD1O14646 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC29.42■■■□□ 2.3
CHD1O14646 POLD4-211ENST00000539074 714 ntTSL 3 BASIC29.42■■■□□ 2.3
CHD1O14646 AC004449.1-201ENST00000564240 433 ntBASIC29.42■■■□□ 2.3
CHD1O14646 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
CHD1O14646 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC29.42■■■□□ 2.3
CHD1O14646 ADM-208ENST00000534464 1640 ntTSL 2 BASIC29.42■■■□□ 2.3
CHD1O14646 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC29.42■■■□□ 2.3
CHD1O14646 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CHD1O14646 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
CHD1O14646 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC29.42■■■□□ 2.3
CHD1O14646 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC29.42■■■□□ 2.3
CHD1O14646 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
CHD1O14646 AC092902.6-201ENST00000641783 218 ntBASIC29.42■■■□□ 2.3
CHD1O14646 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
CHD1O14646 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CHD1O14646 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHD1O14646 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHD1O14646 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHD1O14646 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC29.41■■■□□ 2.3
CHD1O14646 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC29.41■■■□□ 2.3
CHD1O14646 ARTN-206ENST00000472435 402 ntTSL 3 BASIC29.41■■■□□ 2.3
CHD1O14646 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC29.41■■■□□ 2.3
CHD1O14646 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
CHD1O14646 AC009093.7-201ENST00000623853 1223 ntBASIC29.41■■■□□ 2.3
CHD1O14646 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
CHD1O14646 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHD1O14646 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHD1O14646 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHD1O14646 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHD1O14646 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CHD1O14646 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHD1O14646 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC29.4■■■□□ 2.3
CHD1O14646 NCF1C-201ENST00000438382 1427 ntBASIC29.4■■■□□ 2.3
CHD1O14646 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CHD1O14646 NMU-203ENST00000507338 658 ntTSL 3 BASIC29.4■■■□□ 2.3
CHD1O14646 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
CHD1O14646 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC29.4■■■□□ 2.3
CHD1O14646 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC29.4■■■□□ 2.3
CHD1O14646 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CHD1O14646 AD001527.2-201ENST00000622994 785 ntBASIC29.4■■■□□ 2.3
CHD1O14646 PC-214ENST00000628663 1470 ntTSL 5 BASIC29.4■■■□□ 2.3
CHD1O14646 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC29.4■■■□□ 2.3
CHD1O14646 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHD1O14646 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHD1O14646 SPDYE21P-201ENST00000413323 827 ntBASIC29.4■■■□□ 2.3
CHD1O14646 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
CHD1O14646 VN2R19P-201ENST00000442399 1052 ntBASIC29.4■■■□□ 2.3
CHD1O14646 FAM86GP-201ENST00000448322 971 ntBASIC29.4■■■□□ 2.3
CHD1O14646 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC29.4■■■□□ 2.3
CHD1O14646 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC29.4■■■□□ 2.3
CHD1O14646 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHD1O14646 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
CHD1O14646 STK25-234ENST00000535007 2459 ntTSL 2 BASIC29.4■■■□□ 2.3
CHD1O14646 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC29.39■■■□□ 2.3
CHD1O14646 AC148477.5-201ENST00000625164 1645 ntBASIC29.39■■■□□ 2.3
CHD1O14646 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC29.39■■■□□ 2.3
CHD1O14646 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CHD1O14646 AC063926.2-201ENST00000623766 1308 ntBASIC29.39■■■□□ 2.3
CHD1O14646 AC093520.2-201ENST00000561830 333 ntBASIC29.39■■■□□ 2.3
CHD1O14646 AC004706.3-202ENST00000621574 984 ntBASIC29.39■■■□□ 2.3
CHD1O14646 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC29.39■■■□□ 2.29
CHD1O14646 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC29.39■■■□□ 2.29
CHD1O14646 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
CHD1O14646 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
CHD1O14646 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms