Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.28■□□□□ 0.36
NTN3O00634 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
NTN3O00634 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NTN3O00634 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
NTN3O00634 ZNF259P1-201ENST00000407656 1365 ntBASIC17.28■□□□□ 0.36
NTN3O00634 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NTN3O00634 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NTN3O00634 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NTN3O00634 PMS2P7-201ENST00000506558 1336 ntBASIC17.27■□□□□ 0.36
NTN3O00634 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NTN3O00634 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NTN3O00634 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NTN3O00634 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NTN3O00634 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.27■□□□□ 0.36
NTN3O00634 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NTN3O00634 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NTN3O00634 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.27■□□□□ 0.36
NTN3O00634 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NTN3O00634 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.27■□□□□ 0.36
NTN3O00634 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.27■□□□□ 0.36
NTN3O00634 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.27■□□□□ 0.36
NTN3O00634 AC145285.3-201ENST00000564603 959 ntBASIC17.27■□□□□ 0.36
NTN3O00634 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.27■□□□□ 0.36
NTN3O00634 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NTN3O00634 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.27■□□□□ 0.36
NTN3O00634 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NTN3O00634 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NTN3O00634 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NTN3O00634 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NTN3O00634 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NTN3O00634 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NTN3O00634 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.27■□□□□ 0.35
NTN3O00634 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
NTN3O00634 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NTN3O00634 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NTN3O00634 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NTN3O00634 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NTN3O00634 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NTN3O00634 AL356309.3-201ENST00000624132 1934 ntBASIC17.26■□□□□ 0.35
NTN3O00634 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.26■□□□□ 0.35
NTN3O00634 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.26■□□□□ 0.35
NTN3O00634 IGHV3-22-201ENST00000520721 359 ntBASIC17.26■□□□□ 0.35
NTN3O00634 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.26■□□□□ 0.35
NTN3O00634 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NTN3O00634 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.26■□□□□ 0.35
NTN3O00634 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NTN3O00634 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
NTN3O00634 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NTN3O00634 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NTN3O00634 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NTN3O00634 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NTN3O00634 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NTN3O00634 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NTN3O00634 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NTN3O00634 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.25■□□□□ 0.35
NTN3O00634 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NTN3O00634 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NTN3O00634 RPS2P1-201ENST00000434010 821 ntBASIC17.25■□□□□ 0.35
NTN3O00634 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NTN3O00634 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.25■□□□□ 0.35
NTN3O00634 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.25■□□□□ 0.35
NTN3O00634 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NTN3O00634 TERC-201ENST00000602385 541 ntBASIC17.25■□□□□ 0.35
NTN3O00634 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.25■□□□□ 0.35
NTN3O00634 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.25■□□□□ 0.35
NTN3O00634 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NTN3O00634 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.25■□□□□ 0.35
NTN3O00634 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.25■□□□□ 0.35
NTN3O00634 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.25■□□□□ 0.35
NTN3O00634 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NTN3O00634 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NTN3O00634 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NTN3O00634 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NTN3O00634 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NTN3O00634 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NTN3O00634 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NTN3O00634 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NTN3O00634 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NTN3O00634 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NTN3O00634 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NTN3O00634 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NTN3O00634 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
NTN3O00634 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NTN3O00634 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.24■□□□□ 0.35
NTN3O00634 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NTN3O00634 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.24■□□□□ 0.35
NTN3O00634 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.24■□□□□ 0.35
NTN3O00634 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.24■□□□□ 0.35
NTN3O00634 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.24■□□□□ 0.35
NTN3O00634 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.24■□□□□ 0.35
NTN3O00634 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.24■□□□□ 0.35
NTN3O00634 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.24■□□□□ 0.35
NTN3O00634 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.24■□□□□ 0.35
NTN3O00634 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.24■□□□□ 0.35
NTN3O00634 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NTN3O00634 AL139288.1-201ENST00000623748 933 ntBASIC17.24■□□□□ 0.35
NTN3O00634 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
NTN3O00634 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NTN3O00634 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NTN3O00634 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms