Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SOX1O00570 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.39■□□□□ 0.69
SOX1O00570 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX1O00570 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX1O00570 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX1O00570 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.39■□□□□ 0.69
SOX1O00570 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SOX1O00570 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.39■□□□□ 0.69
SOX1O00570 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX1O00570 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX1O00570 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX1O00570 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX1O00570 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX1O00570 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.38■□□□□ 0.69
SOX1O00570 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX1O00570 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SOX1O00570 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.38■□□□□ 0.69
SOX1O00570 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX1O00570 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SOX1O00570 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SOX1O00570 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.38■□□□□ 0.69
SOX1O00570 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.38■□□□□ 0.69
SOX1O00570 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SOX1O00570 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SOX1O00570 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.38■□□□□ 0.69
SOX1O00570 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.38■□□□□ 0.69
SOX1O00570 KRT8P32-201ENST00000512863 1461 ntBASIC19.38■□□□□ 0.69
SOX1O00570 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.38■□□□□ 0.69
SOX1O00570 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX1O00570 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.38■□□□□ 0.69
SOX1O00570 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SOX1O00570 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SOX1O00570 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX1O00570 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
SOX1O00570 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 AC079776.2-201ENST00000641154 1609 ntBASIC19.37■□□□□ 0.69
SOX1O00570 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.37■□□□□ 0.69
SOX1O00570 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.37■□□□□ 0.69
SOX1O00570 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SOX1O00570 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.37■□□□□ 0.69
SOX1O00570 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.37■□□□□ 0.69
SOX1O00570 ACTG1P14-201ENST00000446382 1122 ntBASIC19.37■□□□□ 0.69
SOX1O00570 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.37■□□□□ 0.69
SOX1O00570 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.37■□□□□ 0.69
SOX1O00570 AC113404.2-201ENST00000507884 177 ntBASIC19.37■□□□□ 0.69
SOX1O00570 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.37■□□□□ 0.69
SOX1O00570 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SOX1O00570 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.37■□□□□ 0.69
SOX1O00570 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SOX1O00570 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SOX1O00570 AC105339.1-204ENST00000636249 355 ntBASIC19.37■□□□□ 0.69
SOX1O00570 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.37■□□□□ 0.69
SOX1O00570 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX1O00570 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.37■□□□□ 0.69
SOX1O00570 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX1O00570 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SOX1O00570 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SOX1O00570 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.36■□□□□ 0.69
SOX1O00570 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX1O00570 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SOX1O00570 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SOX1O00570 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SOX1O00570 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.36■□□□□ 0.69
SOX1O00570 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX1O00570 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SOX1O00570 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.36■□□□□ 0.69
SOX1O00570 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX1O00570 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.36■□□□□ 0.69
SOX1O00570 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX1O00570 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.36■□□□□ 0.69
SOX1O00570 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SOX1O00570 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX1O00570 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX1O00570 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX1O00570 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX1O00570 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.35■□□□□ 0.69
SOX1O00570 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SOX1O00570 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX1O00570 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX1O00570 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SOX1O00570 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.35■□□□□ 0.69
SOX1O00570 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SOX1O00570 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SOX1O00570 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.35■□□□□ 0.69
SOX1O00570 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.35■□□□□ 0.69
SOX1O00570 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms