Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3B1O00203 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
AP3B1O00203 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.5■□□□□ 0.55
AP3B1O00203 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.5■□□□□ 0.55
AP3B1O00203 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.5■□□□□ 0.55
AP3B1O00203 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.5■□□□□ 0.55
AP3B1O00203 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.5■□□□□ 0.55
AP3B1O00203 NEK4P2-201ENST00000580004 1012 ntBASIC18.5■□□□□ 0.55
AP3B1O00203 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP3B1O00203 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
AP3B1O00203 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3B1O00203 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.5■□□□□ 0.55
AP3B1O00203 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
AP3B1O00203 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
AP3B1O00203 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP3B1O00203 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3B1O00203 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.5■□□□□ 0.55
AP3B1O00203 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3B1O00203 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3B1O00203 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.49■□□□□ 0.55
AP3B1O00203 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
AP3B1O00203 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.49■□□□□ 0.55
AP3B1O00203 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
AP3B1O00203 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.49■□□□□ 0.55
AP3B1O00203 HMGA1P5-201ENST00000412453 271 ntBASIC18.49■□□□□ 0.55
AP3B1O00203 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.49■□□□□ 0.55
AP3B1O00203 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3B1O00203 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.49■□□□□ 0.55
AP3B1O00203 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
AP3B1O00203 AC010240.3-201ENST00000607688 395 ntBASIC18.49■□□□□ 0.55
AP3B1O00203 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.49■□□□□ 0.55
AP3B1O00203 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.49■□□□□ 0.55
AP3B1O00203 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.49■□□□□ 0.55
AP3B1O00203 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3B1O00203 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
AP3B1O00203 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
AP3B1O00203 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3B1O00203 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3B1O00203 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.48■□□□□ 0.55
AP3B1O00203 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3B1O00203 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3B1O00203 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3B1O00203 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3B1O00203 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.48■□□□□ 0.55
AP3B1O00203 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3B1O00203 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
AP3B1O00203 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
AP3B1O00203 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.48■□□□□ 0.55
AP3B1O00203 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
AP3B1O00203 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.48■□□□□ 0.55
AP3B1O00203 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.48■□□□□ 0.55
AP3B1O00203 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.48■□□□□ 0.55
AP3B1O00203 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.48■□□□□ 0.55
AP3B1O00203 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP3B1O00203 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3B1O00203 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.48■□□□□ 0.55
AP3B1O00203 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.48■□□□□ 0.55
AP3B1O00203 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3B1O00203 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3B1O00203 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.47■□□□□ 0.55
AP3B1O00203 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3B1O00203 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3B1O00203 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.47■□□□□ 0.55
AP3B1O00203 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.47■□□□□ 0.55
AP3B1O00203 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3B1O00203 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
AP3B1O00203 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
AP3B1O00203 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3B1O00203 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.47■□□□□ 0.55
AP3B1O00203 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3B1O00203 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3B1O00203 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.47■□□□□ 0.55
AP3B1O00203 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.47■□□□□ 0.55
AP3B1O00203 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.47■□□□□ 0.55
AP3B1O00203 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.47■□□□□ 0.55
AP3B1O00203 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.47■□□□□ 0.55
AP3B1O00203 AC093010.1-201ENST00000473625 1624 ntBASIC18.47■□□□□ 0.55
AP3B1O00203 GNAS-203ENST00000306120 1878 ntBASIC18.47■□□□□ 0.55
AP3B1O00203 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3B1O00203 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3B1O00203 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3B1O00203 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3B1O00203 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.47■□□□□ 0.55
AP3B1O00203 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3B1O00203 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3B1O00203 AC068880.1-201ENST00000507289 2297 ntBASIC18.47■□□□□ 0.55
AP3B1O00203 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms