Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TSPY22P-201ENST00000427496 604 ntBASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 MIR3652-201ENST00000579335 131 ntBASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 AL031598.1-201ENST00000561511 1773 ntBASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA3F8WFD2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NPIPA3F8WFD2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NPIPA3F8WFD2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 PRELID1P1-202ENST00000567272 903 ntBASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 RNF126P1-202ENST00000569893 925 ntBASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 AP002414.4-201ENST00000589764 1148 ntBASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPA3F8WFD2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA3F8WFD2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms