Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA1A8K7I4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCA1A8K7I4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCA1A8K7I4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA1A8K7I4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA1A8K7I4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA1A8K7I4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCA1A8K7I4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLCA1A8K7I4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 ATP5G1P1-201ENST00000448724 379 ntBASIC17.11■□□□□ 0.33
CLCA1A8K7I4 AC010203.1-204ENST00000548782 407 ntBASIC17.11■□□□□ 0.33
CLCA1A8K7I4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 BCL2-203ENST00000589955 5011 ntBASIC17.11■□□□□ 0.33
CLCA1A8K7I4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLCA1A8K7I4 AC134043.2-201ENST00000624206 2238 ntBASIC17.11■□□□□ 0.33
CLCA1A8K7I4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.1■□□□□ 0.33
CLCA1A8K7I4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 AC073508.3-201ENST00000619697 1419 ntBASIC17.1■□□□□ 0.33
CLCA1A8K7I4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCA1A8K7I4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 HMGA1P5-201ENST00000412453 271 ntBASIC17.09■□□□□ 0.33
CLCA1A8K7I4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 AC007663.1-201ENST00000438948 1240 ntBASIC17.09■□□□□ 0.33
CLCA1A8K7I4 TSPY17P-201ENST00000450329 467 ntBASIC17.09■□□□□ 0.33
CLCA1A8K7I4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 CA15P1-201ENST00000481698 905 ntBASIC17.09■□□□□ 0.33
CLCA1A8K7I4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCA1A8K7I4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms