Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 AC004951.3-201ENST00000418645 1148 ntBASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 FAM207BP-201ENST00000447172 505 ntBASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 AC092647.4-201ENST00000457211 535 ntBASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 AL391262.2-201ENST00000622466 494 ntBASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPDYE4A6NLX3 RCC2P6-201ENST00000526625 1557 ntBASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 HMGA1P5-201ENST00000412453 271 ntBASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 MFAP1P1-201ENST00000442257 1255 ntBASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 AC022616.7-201ENST00000525383 220 ntBASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.63■□□□□ 0.89
SPDYE4A6NLX3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDYE4A6NLX3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms