Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 AC012618.2-201ENST00000428058 849 ntBASIC16.36■□□□□ 0.21
TVP23AA6NH52 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.36■□□□□ 0.21
TVP23AA6NH52 AP001412.1-201ENST00000608405 714 ntBASIC16.36■□□□□ 0.21
TVP23AA6NH52 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.36■□□□□ 0.21
TVP23AA6NH52 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TVP23AA6NH52 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TVP23AA6NH52 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TVP23AA6NH52 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TVP23AA6NH52 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TVP23AA6NH52 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TVP23AA6NH52 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TVP23AA6NH52 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.36■□□□□ 0.21
TVP23AA6NH52 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TVP23AA6NH52 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TVP23AA6NH52 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
TVP23AA6NH52 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TVP23AA6NH52 AC138028.4-201ENST00000564984 1845 ntBASIC16.35■□□□□ 0.21
TVP23AA6NH52 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 AC036111.1-201ENST00000533973 1582 ntBASIC16.35■□□□□ 0.21
TVP23AA6NH52 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 MIR3180-5-201ENST00000583743 153 ntBASIC16.35■□□□□ 0.21
TVP23AA6NH52 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 AC026471.5-201ENST00000615068 467 ntBASIC16.35■□□□□ 0.21
TVP23AA6NH52 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TVP23AA6NH52 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TVP23AA6NH52 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 Z99916.2-201ENST00000604037 246 ntBASIC16.34■□□□□ 0.21
TVP23AA6NH52 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 GMCL1P1-201ENST00000463439 1581 ntBASIC16.34■□□□□ 0.21
TVP23AA6NH52 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.34■□□□□ 0.21
TVP23AA6NH52 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TVP23AA6NH52 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TVP23AA6NH52 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.33■□□□□ 0.21
TVP23AA6NH52 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TVP23AA6NH52 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TVP23AA6NH52 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TVP23AA6NH52 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms