Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AL133373.2-201ENST00000623187 2828 ntBASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AL359075.1-203ENST00000462729 1002 ntBASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AL441883.1-201ENST00000566170 1045 ntBASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.73□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV4S1A1TA0A5B7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AL031133.1-201ENST00000406807 723 ntBASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms