Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTCH2Q9Y6C5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 AL163051.1-201ENST00000569214 1512 ntBASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 MIR770-201ENST00000390219 98 ntBASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 AC254562.1-201ENST00000417586 456 ntBASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 AC106028.4-201ENST00000614509 607 ntBASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCH2Q9Y6C5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 LAGE3P1-201ENST00000425356 484 ntBASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 MTCL1P1-201ENST00000446207 792 ntBASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 KRT18P2-201ENST00000447938 1258 ntBASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTCH2Q9Y6C5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 AC011467.4-201ENST00000594891 528 ntBASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.58■□□□□ 0.89
PTCH2Q9Y6C5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PTCH2Q9Y6C5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.58■□□□□ 0.88
PTCH2Q9Y6C5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.58■□□□□ 0.88
PTCH2Q9Y6C5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTCH2Q9Y6C5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.58■□□□□ 0.88
PTCH2Q9Y6C5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTCH2Q9Y6C5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTCH2Q9Y6C5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTCH2Q9Y6C5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.57■□□□□ 0.88
PTCH2Q9Y6C5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTCH2Q9Y6C5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PTCH2Q9Y6C5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms