Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 AP002982.1-201ENST00000492365 877 ntBASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 AF186192.3-201ENST00000583427 947 ntBASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 KRT8P8-201ENST00000434750 1448 ntBASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4B1Q9Y6B7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 AC073195.1-201ENST00000607241 877 ntBASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 AL049637.2-201ENST00000641778 930 ntBASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4B1Q9Y6B7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
AP4B1Q9Y6B7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.58■□□□□ 0.41
AP4B1Q9Y6B7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms