Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC106820.2-201ENST00000563775 3264 ntBASIC16.92■□□□□ 0.3
HRH3Q9Y5N1 HOXB1-202ENST00000577092 1414 ntBASIC16.92■□□□□ 0.3
HRH3Q9Y5N1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HRH3Q9Y5N1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.92■□□□□ 0.3
HRH3Q9Y5N1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HRH3Q9Y5N1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HRH3Q9Y5N1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HRH3Q9Y5N1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HRH3Q9Y5N1 AC034236.2-201ENST00000606662 1610 ntBASIC16.92■□□□□ 0.3
HRH3Q9Y5N1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HRH3Q9Y5N1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 DUSP5P1-201ENST00000441325 1139 ntBASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 AC079602.3-201ENST00000623931 403 ntBASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HRH3Q9Y5N1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 KRT18P48-201ENST00000434763 852 ntBASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 AC092597.1-201ENST00000487352 616 ntBASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HRH3Q9Y5N1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HRH3Q9Y5N1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.89■□□□□ 0.3
HRH3Q9Y5N1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HRH3Q9Y5N1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 AC010240.3-201ENST00000607688 395 ntBASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HRH3Q9Y5N1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HRH3Q9Y5N1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms