Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHAC2Q9Y5I4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHAC2Q9Y5I4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 RPS2P1-201ENST00000434010 821 ntBASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 AC011467.2-201ENST00000598425 242 ntBASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 AC009154.2-201ENST00000621177 724 ntBASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHAC2Q9Y5I4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 RBM17P3-201ENST00000417687 1192 ntBASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 SCARNA2-201ENST00000458748 420 ntBASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 AC093909.1-201ENST00000504731 1122 ntBASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 AP005117.1-201ENST00000584346 1413 ntBASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC2Q9Y5I4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 AC009533.2-201ENST00000543664 586 ntBASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 TERC-201ENST00000602385 541 ntBASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC2Q9Y5I4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms