Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHB9Q9Y5E1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB9Q9Y5E1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB9Q9Y5E1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHB9Q9Y5E1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHB9Q9Y5E1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 TSSC2-201ENST00000450217 709 ntBASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 AC009065.1-201ENST00000564055 1225 ntBASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB9Q9Y5E1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 HBZP1-201ENST00000354915 429 ntBASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB9Q9Y5E1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 KRT17P6-201ENST00000453795 1220 ntBASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 GPALPP1-207ENST00000611650 899 ntBASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB9Q9Y5E1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 AC009102.3-201ENST00000623118 1491 ntBASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 MIR149-201ENST00000384879 89 ntBASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 AC092597.1-201ENST00000487352 616 ntBASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB9Q9Y5E1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms