Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00588Q9Y4M8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00588Q9Y4M8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00588Q9Y4M8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00588Q9Y4M8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00588Q9Y4M8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00588Q9Y4M8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00588Q9Y4M8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00588Q9Y4M8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 AL024508.2-201ENST00000607749 1894 ntBASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00588Q9Y4M8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 AL031598.1-201ENST00000561511 1773 ntBASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 AC113404.2-201ENST00000507884 177 ntBASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00588Q9Y4M8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 NUS1P1-201ENST00000446295 882 ntBASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 RN7SL606P-201ENST00000472779 293 ntBASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 VENTXP7-201ENST00000475503 772 ntBASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 AC104819.1-201ENST00000504587 486 ntBASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 AC074051.2-201ENST00000565115 352 ntBASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 AC012615.1-201ENST00000565797 1299 ntBASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 Z69720.1-201ENST00000601483 472 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms