Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 NIFKP9-201ENST00000419265 221 ntBASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 AL049637.2-201ENST00000641778 930 ntBASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.98■□□□□ 0.95
R3HCC1Q9Y3T6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 GNAS-203ENST00000306120 1878 ntBASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 CR392000.1-201ENST00000624770 1228 ntBASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 AL645608.8-201ENST00000606034 2086 ntBASIC20.97■□□□□ 0.95
R3HCC1Q9Y3T6 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
R3HCC1Q9Y3T6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
R3HCC1Q9Y3T6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
R3HCC1Q9Y3T6 KRT16P1-201ENST00000399124 1418 ntBASIC20.95■□□□□ 0.95
R3HCC1Q9Y3T6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 CICP6-201ENST00000457191 2729 ntBASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
R3HCC1Q9Y3T6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms