Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 HLA-L-209ENST00000420110 1011 ntBASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 NCF1B-203ENST00000435988 1254 ntBASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 CNN2P6-201ENST00000439038 900 ntBASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
LRCH1Q9Y2L9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH1Q9Y2L9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 HEIH-201ENST00000623091 1652 ntBASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 GPX1P1-201ENST00000388829 606 ntBASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 AL121832.2-201ENST00000610979 668 ntBASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 MYC-208ENST00000641036 567 ntBASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH1Q9Y2L9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms