Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 KRT8P7-201ENST00000533003 1432 ntBASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 HOXB1-202ENST00000577092 1414 ntBASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 AC112907.2-201ENST00000448639 330 ntBASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 RASA4DP-201ENST00000460726 1199 ntBASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 AC104390.1-201ENST00000555663 520 ntBASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 AL157888.1-201ENST00000631930 593 ntBASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPH3AQ9Y2J0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 STARP1-201ENST00000397973 869 ntBASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 AC010240.3-201ENST00000607688 395 ntBASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPH3AQ9Y2J0 AC005082.1-201ENST00000413042 2259 ntBASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.77■□□□□ 0.28
RPH3AQ9Y2J0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms