Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF6Q9Y252 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RNF6Q9Y252 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF6Q9Y252 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
RNF6Q9Y252 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.27■□□□□ 0.36
RNF6Q9Y252 AC008040.2-201ENST00000461049 708 ntBASIC17.27■□□□□ 0.36
RNF6Q9Y252 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF6Q9Y252 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RNF6Q9Y252 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RNF6Q9Y252 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF6Q9Y252 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.35
RNF6Q9Y252 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF6Q9Y252 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF6Q9Y252 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
RNF6Q9Y252 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF6Q9Y252 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF6Q9Y252 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 ESPNP-201ENST00000270691 2015 ntBASIC17.26■□□□□ 0.35
RNF6Q9Y252 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 AK4P3-201ENST00000418260 669 ntBASIC17.26■□□□□ 0.35
RNF6Q9Y252 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 BX664615.1-201ENST00000443558 458 ntBASIC17.26■□□□□ 0.35
RNF6Q9Y252 FAM207BP-201ENST00000447172 505 ntBASIC17.26■□□□□ 0.35
RNF6Q9Y252 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF6Q9Y252 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF6Q9Y252 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF6Q9Y252 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF6Q9Y252 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF6Q9Y252 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF6Q9Y252 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF6Q9Y252 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 HMGA1P5-201ENST00000412453 271 ntBASIC17.25■□□□□ 0.35
RNF6Q9Y252 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF6Q9Y252 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 MFAP1P1-201ENST00000442257 1255 ntBASIC17.25■□□□□ 0.35
RNF6Q9Y252 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF6Q9Y252 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF6Q9Y252 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF6Q9Y252 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF6Q9Y252 PRORSD1P-202ENST00000563365 2154 ntBASIC17.25■□□□□ 0.35
RNF6Q9Y252 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
RNF6Q9Y252 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF6Q9Y252 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF6Q9Y252 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF6Q9Y252 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RNF6Q9Y252 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF6Q9Y252 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms