Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC036111.1-201ENST00000533973 1582 ntBASIC21.53■■□□□ 1.04
SMC3Q9UQE7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 AC012618.2-201ENST00000428058 849 ntBASIC21.52■■□□□ 1.04
SMC3Q9UQE7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 AL049637.2-201ENST00000641778 930 ntBASIC21.52■■□□□ 1.04
SMC3Q9UQE7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMC3Q9UQE7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMC3Q9UQE7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.52■■□□□ 1.03
SMC3Q9UQE7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMC3Q9UQE7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMC3Q9UQE7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.52■■□□□ 1.03
SMC3Q9UQE7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 AL163051.1-201ENST00000569214 1512 ntBASIC21.51■■□□□ 1.03
SMC3Q9UQE7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 AL355355.2-201ENST00000442321 338 ntBASIC21.51■■□□□ 1.03
SMC3Q9UQE7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 AC233702.5-201ENST00000584107 538 ntBASIC21.51■■□□□ 1.03
SMC3Q9UQE7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.51■■□□□ 1.03
SMC3Q9UQE7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.51■■□□□ 1.03
SMC3Q9UQE7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.5■■□□□ 1.03
SMC3Q9UQE7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 SDHAP2-201ENST00000455183 2001 ntBASIC21.5■■□□□ 1.03
SMC3Q9UQE7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 GCSHP5-201ENST00000443090 522 ntBASIC21.5■■□□□ 1.03
SMC3Q9UQE7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 OR6D1P-202ENST00000641007 5290 ntBASIC21.5■■□□□ 1.03
SMC3Q9UQE7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMC3Q9UQE7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 LINC00896-202ENST00000609602 2128 ntBASIC21.49■■□□□ 1.03
SMC3Q9UQE7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.49■■□□□ 1.03
SMC3Q9UQE7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms