Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 AC139887.4-201ENST00000607877 719 ntBASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 AL031432.5-201ENST00000641059 760 ntBASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4E1Q9UPM8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19■□□□□ 0.63
AP4E1Q9UPM8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 LINC01126-201ENST00000623515 1646 ntBASIC19■□□□□ 0.63
AP4E1Q9UPM8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19■□□□□ 0.63
AP4E1Q9UPM8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
AP4E1Q9UPM8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
AP4E1Q9UPM8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19■□□□□ 0.63
AP4E1Q9UPM8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
AP4E1Q9UPM8 AC117947.1-201ENST00000427448 529 ntBASIC19■□□□□ 0.63
AP4E1Q9UPM8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19■□□□□ 0.63
AP4E1Q9UPM8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 YBX1P2-201ENST00000489612 999 ntBASIC19■□□□□ 0.63
AP4E1Q9UPM8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19■□□□□ 0.63
AP4E1Q9UPM8 AC034232.1-201ENST00000506026 1064 ntBASIC19■□□□□ 0.63
AP4E1Q9UPM8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
AP4E1Q9UPM8 AC011558.1-201ENST00000623459 338 ntBASIC19■□□□□ 0.63
AP4E1Q9UPM8 PHGDH-209ENST00000641074 1780 ntBASIC19■□□□□ 0.63
AP4E1Q9UPM8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 AL024508.2-201ENST00000607749 1894 ntBASIC19■□□□□ 0.63
AP4E1Q9UPM8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
AP4E1Q9UPM8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19■□□□□ 0.63
AP4E1Q9UPM8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4E1Q9UPM8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.99■□□□□ 0.63
AP4E1Q9UPM8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms