Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 AC004951.3-201ENST00000418645 1148 ntBASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 C1QBPP2-201ENST00000528754 825 ntBASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PCDHGB4Q9UN71 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 AC135776.1-201ENST00000319817 2481 ntBASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 AC128676.1-201ENST00000454392 318 ntBASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 CD99P1-205ENST00000527459 561 ntBASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 MYC-208ENST00000641036 567 ntBASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 AL031985.4-201ENST00000642138 673 ntBASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 KRT16P1-201ENST00000399124 1418 ntBASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB4Q9UN71 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB4Q9UN71 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB4Q9UN71 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB4Q9UN71 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.77■□□□□ 0.43
PCDHGB4Q9UN71 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB4Q9UN71 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB4Q9UN71 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 KRT8P3-201ENST00000519669 1449 ntBASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 AC008894.3-201ENST00000624324 3103 ntBASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB4Q9UN71 RPS2P4-201ENST00000476944 856 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms