Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC27.61■■■□□ 2.01
COL17A1Q9UMD9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 AL391422.3-201ENST00000603791 2761 ntBASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 HCG4B-203ENST00000450128 991 ntBASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 AP000344.2-201ENST00000512987 629 ntBASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC27.6■■■□□ 2.01
COL17A1Q9UMD9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 AC136632.2-201ENST00000512891 861 ntBASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 PGM5P2-202ENST00000637225 1043 ntBASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL17A1Q9UMD9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 AC079776.2-201ENST00000641154 1609 ntBASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 HLA-V-201ENST00000429037 534 ntBASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC27.58■■■□□ 2.01
COL17A1Q9UMD9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
COL17A1Q9UMD9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL17A1Q9UMD9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL17A1Q9UMD9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC27.57■■■□□ 2
COL17A1Q9UMD9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC27.57■■■□□ 2
COL17A1Q9UMD9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL17A1Q9UMD9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
COL17A1Q9UMD9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC27.57■■■□□ 2
COL17A1Q9UMD9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL17A1Q9UMD9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
COL17A1Q9UMD9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC27.57■■■□□ 2
COL17A1Q9UMD9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC27.57■■■□□ 2
COL17A1Q9UMD9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC27.57■■■□□ 2
COL17A1Q9UMD9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
COL17A1Q9UMD9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
COL17A1Q9UMD9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
COL17A1Q9UMD9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC27.57■■■□□ 2
COL17A1Q9UMD9 AC005225.4-201ENST00000557330 545 ntBASIC27.57■■■□□ 2
COL17A1Q9UMD9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC27.57■■■□□ 2
COL17A1Q9UMD9 AC068587.9-201ENST00000641814 219 ntBASIC27.57■■■□□ 2
COL17A1Q9UMD9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
COL17A1Q9UMD9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL17A1Q9UMD9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC27.56■■■□□ 2
COL17A1Q9UMD9 Z98044.1-201ENST00000632503 1764 ntBASIC27.56■■■□□ 2
COL17A1Q9UMD9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL17A1Q9UMD9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC27.56■■■□□ 2
COL17A1Q9UMD9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL17A1Q9UMD9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC27.56■■■□□ 2
COL17A1Q9UMD9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL17A1Q9UMD9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
COL17A1Q9UMD9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC27.56■■■□□ 2
COL17A1Q9UMD9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC27.56■■■□□ 2
COL17A1Q9UMD9 AC069262.1-201ENST00000539058 672 ntBASIC27.56■■■□□ 2
COL17A1Q9UMD9 AC006557.2-201ENST00000592985 1240 ntBASIC27.56■■■□□ 2
COL17A1Q9UMD9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL17A1Q9UMD9 AC073592.4-201ENST00000623827 446 ntBASIC27.56■■■□□ 2
COL17A1Q9UMD9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL17A1Q9UMD9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL17A1Q9UMD9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
COL17A1Q9UMD9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC27.56■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms