Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNL1Q9UK58 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.21■■□□□ 1.31
CCNL1Q9UK58 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.21■■□□□ 1.31
CCNL1Q9UK58 MIR3197-201ENST00000582241 73 ntBASIC23.21■■□□□ 1.31
CCNL1Q9UK58 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC23.21■■□□□ 1.31
CCNL1Q9UK58 AC064836.3-201ENST00000607928 673 ntBASIC23.21■■□□□ 1.31
CCNL1Q9UK58 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC23.21■■□□□ 1.31
CCNL1Q9UK58 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC23.21■■□□□ 1.31
CCNL1Q9UK58 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.21■■□□□ 1.31
CCNL1Q9UK58 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNL1Q9UK58 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CCNL1Q9UK58 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCNL1Q9UK58 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 CYGB-205ENST00000590175 830 ntTSL 3 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNL1Q9UK58 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 SRP19-202ENST00000445150 833 ntTSL 2 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 COPE-211ENST00000600932 1144 ntTSL 5 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 AP000867.4-201ENST00000641616 219 ntBASIC23.19■■□□□ 1.3
CCNL1Q9UK58 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.19■■□□□ 1.3
CCNL1Q9UK58 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 CYMP-203ENST00000474680 1263 ntBASIC23.18■■□□□ 1.3
CCNL1Q9UK58 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.18■■□□□ 1.3
CCNL1Q9UK58 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 BX005266.1-201ENST00000473402 457 ntBASIC23.17■■□□□ 1.3
CCNL1Q9UK58 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
CCNL1Q9UK58 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms